Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00320 ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTTCCGGCGGCTGGTTCTACCCAAGATGCCTTTGTCTCCGCCTGGAAGAAGGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGACAAATGGGTGTTCTTCCTGGTCACGTACCTACGATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACACGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCTTTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGATCAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGACATGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG 603 49.25 MFRRASTLLARPFLSARTRSFSTDLPAAGSTQDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIDQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDMHSALNSALTG* 201
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 2150309 2152345 + Chy6G108480.1 Chy06g00320 228029
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00320 200 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 72 186 IPR001469 GO:0015986|GO:0045261|GO:0046933
Chy06g00320 200 Gene3D - 157 199 - -
Chy06g00320 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Chy06g00320 200 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 200 - -
Chy06g00320 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Chy06g00320 200 Coils Coil 165 185 - -
Chy06g00320 200 Gene3D - 58 156 IPR036771 -
Chy06g00320 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Chy06g00320 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986
Chy06g00320 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 200 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00320 K02134 - csv:101206104 384.415