Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00372 ATGGGTAGCGGAGAAAAGGTCTTCACTTTGAAGGAAGTCGCTGAACACAACAATCACAAGGATTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAAGACCATCCTGGTGGTGATGATGTTTTGTTATCAGCTACAGGGAAAGATGCAACCGACGACTTTGAAGATGTGGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTACGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCTTACACGCCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAATTCATCATCAAGCTTCTCCAGTTCCTTGTCCCACTTGCGATTTTGGGATTGGCAGTCGCTATACGCTTCTACACCAAACAAGCTTGA 405 44.69 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA* 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2493956 2496523 + Chy6G109000.1 Chy06g00372 228081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00372 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Chy06g00372 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Chy06g00372 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Chy06g00372 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Chy06g00372 134 Gene3D - 2 86 IPR036400 -
Chy06g00372 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Chy06g00372 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Chy06g00372 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Chy06g00372 134 PANTHER CYTOCHROME B5 1 132 - -
Chy06g00372 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Chy06g00372 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Chy06g00372 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00069 Chy-Chr6:478771 Chy06g00372 Chy-Chr6:2493956 3.38E-44 dispersed
Chy06g00372 Chy-Chr6:2493956 Chy09g01458 Chy-Chr9:16067861 1.58E-48 dispersed
Chy11g01672 Chy-Chr11:23206119 Chy06g00372 Chy-Chr6:2493956 8.00E-11 dispersed
Chy03g00719 Chy-Chr3:9661591 Chy06g00372 Chy-Chr6:2493956 6.77E-35 transposed
Chy04g00851 Chy-Chr4:11107494 Chy06g00372 Chy-Chr6:2493956 4.57E-67 wgd
Chy05g00551 Chy-Chr5:5995328 Chy06g00372 Chy-Chr6:2493956 2.29E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00372 K23490 - csv:101214209 275.404