Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00415 ATGGCTAGTCAAGTAAATCTAGCGGTTGGATCTCTTGTTTGGGTTGAGGATCCTGAGGTAGCTTGGCTAGATGGGGAAGTCCTGGAAGTTAATGGTGAAGATATCAAAGTACTTTGTACGTCAGGAACTACTGTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCTCCCTGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCGGGGCTTCTACAAAACTTAAAATCTCGTTATGATGTTAATGAAATTTATACCTATACTGGAAGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCTTATAGACAGATGATTAATGAAAGTATAAGCCAGTCAATTTTAGTTAGTGGGGAAAGTGGTGCTGGTAAAACAGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCGAACCCTGTTCTTGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGCCGTTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGCTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTCTACATGCTTTGTGCTGCACCGACAGAGGAAATTGAGAAGTATAAATTAGGGAATCCAAGAACATTTCATTATCTTAATCAGTCTAATTGCTATGAACTTGATGGAGTGGATGATTCCAAGGAATATCTTTCAACTAGGAAAGCTATGGATGTTGTTGGAATAAGTACAACTGAGCAGGATGCGATATTTCGAGTTGTAGCTGCGGTACTTCATTTGGGCAACGTCGAATTTGCAAAGGGGACGGAGATAGACTCCTCTGAACCGAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGCGATGAAACCATAACTAAATGTCTTGATCCGGACTCTGCAACTCTTAGTAGGGATGCTTTAGCAAAGATTGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTGATTCGAAGAACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCGAGATCTACACATGATACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCTAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGCTGAGTGCTTCCAAGTGCACCTTTGTTGCAGGACTCTTCCCCCTCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATTCGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGGCATCTTTGAGAACAATAATGTTTTGCAGCAGCTCCGATGTGGGGGAGTGATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCTACTAGGAAGACGTTTGATGAATTTATTGGTCGGTTTACTATCTTGGCACCTGGTGTTTTGAAGGGGAGCTCTAATGAAGCCACTGGGTGTAAGAGGCTTTTGGAGAAAGTGAACATTAAAGGGTATCAGATTGGTAAAACCAAAGTATTTCTTAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTCTTGGGAAGATCTGCTATGGTTGTCCAAAGGAAAGTACGCTCATATTTGGGACGCAAAAACTTTATTCTTTTGCGGTTGGCTGCTATACAAATTCAAGCCCTGTGTAGAGGGCAAATTGCACGCCAGCATTATGAAGACATTAGAATGGAAGCTGCTTCCATCAAAATCCAAAAGTATTGGCGTATGCATTTTGCCCGATGTTGCTATAAAAGAATTTGCACTTCAGCTGTAGCTATTCAAGCTGGTATCCACGGTATGGTTGCTCGCAAAGAGCTTAAGTTCAGGAGACAAACAAGAGCTGCAATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCTGTATGCATTATGTGAGGATTAGAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGAAAAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAAATCTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGAATGAGGGCTGACATGGAGGAAGCCAAGACTCGAGAAAACACAAAATTGAAGGCCGATTTAGAAGAAATGCGAACTCAATTTCAGGAAACAAAAGCACTGCTTAATGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGCAAGTTCCTGTCATACAAGAGGTTCCCATTGTTGATAATGAGCTGATCAATAAGTTAACTACTGAAAATGAACAACTGAAGGCTCATGTAAGTTCGTTGGAAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACCGTCTTAGTGAAGAGCGGCTGAAGCAGGCTACAGAGGCAGAGTCAAAGATAATCGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAAGTATCCGACTTGGAAACTGAGGACCAAATTCTTAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAAATGTCTGGACGTATAGCAATTCAGCCTTTGGAAAATGGCCACCACGACTTACTAAGCAATGCACCCTCAAAAAAGTATGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAGATTGAAAGGCAGAACGAAGGGATGGACGCTCTATCAACATACCTGACACAGGATCTTGGGTACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTTTCCTTCATTGGAGATCATTTGAAGCTGAAAAAACAAGTGTTTTTGATCGGCTAATTCAGCTGATTGGTTCTGCAATTGAGAATCAGGATGATAATGAACTTATGACCTATTGGTTATCCAACACAACTACATTATTGTTCCTTCTTCAAAAGAGTTTAAAAGCCACACCACGGAAGCCTCCCACCCCTACATCATTTTTTGAGCGGATGACCCAAGGGTTTCGGTCATCTTCTGCCCTTCCAGTTGGCACCCTTGACGTGGTGCGGCAAGTTGAGGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCGTTGATTTCAGCTTGTATCCAGGCTCCAAGATCTTCAAGAGGAAATATTTTAAAATCATCTGGCCAGGAAAATAGCAGTAGCCCTCCCAGTATTAGTAATTCATGGAGCAGCATCATCGGGAGCCTCAACGATCATCTGTGTAGATTGCAACAGAACTTCGTGCCTAACGTTTTGGTTCAGAAGATGTTCACTCAGGTTTTTTCATGTATCAACGTTCAACTTTTCAACAGTCTTTTACTTCGTCGAGAGTGCTGTACGTTTAGCAATGGGGAATATGTGAAGTCAGGATTGGCTGAGTTAGAGATTTGGTGTTCTCAAGCAAAAGAAGAGTATGCTGGGTCATCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTGAGCGTTCAACAGCTTTATAGAATATGTACTCTTTATTGGGACGACAATTACAATACTAGGAGTGTAGCTCCAGATGTTATTTCTAGCATGAAAGTTATGATGACTGAGGATTCCAACGATGAAGATAGTAGTTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCGCGGTTGATGACATATTCACTTCCCTGCAAGAAAAGAATTTTCAGGATGTAAAGCCTCCAGCAGAACTACTAGAGAATCCGGCCTTCCAATTTTTACAGGAATAA 4500 40.93 MASQVNLAVGSLVWVEDPEVAWLDGEVLEVNGEDIKVLCTSGTTVEVKSSNVYPKDPEFPPCGVDDMTKLAYLHEPGLLQNLKSRYDVNEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEEIEKYKLGNPRTFHYLNQSNCYELDGVDDSKEYLSTRKAMDVVGISTTEQDAIFRVVAAVLHLGNVEFAKGTEIDSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSATLSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCTFVAGLFPLLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPGVLKGSSNEATGCKRLLEKVNIKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAMVVQRKVRSYLGRKNFILLRLAAIQIQALCRGQIARQHYEDIRMEAASIKIQKYWRMHFARCCYKRICTSAVAIQAGIHGMVARKELKFRRQTRAAIIIQSRCRQYLACMHYVRIRKAAITTQCAWRGRVARKELRKLKMAAKETGALQAAKNLLEKQVEELTWRLQLEKRMRADMEEAKTRENTKLKADLEEMRTQFQETKALLNEEREAAKKVVEQVPVIQEVPIVDNELINKLTTENEQLKAHVSSLENKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKVSDLETEDQILRQQTLLKPPSRKMSGRIAIQPLENGHHDLLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSTYLTQDLGYSEGKPVAAFVIYKSFLHWRSFEAEKTSVFDRLIQLIGSAIENQDDNELMTYWLSNTTTLLFLLQKSLKATPRKPPTPTSFFERMTQGFRSSSALPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLISACIQAPRSSRGNILKSSGQENSSSPPSISNSWSSIIGSLNDHLCRLQQNFVPNVLVQKMFTQVFSCINVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCSQAKEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMKVMMTEDSNDEDSSSFLLDDNSSIPFAVDDIFTSLQEKNFQDVKPPAELLENPAFQFLQE* 1500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2806607 2824811 - Chy6G109430.1 Chy06g00415 228124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00415 1499 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Chy06g00415 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 887 IPR027417 -
Chy06g00415 1499 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 Gene3D - 443 627 - -
Chy06g00415 1499 PANTHER MYOSIN 6 1497 - -
Chy06g00415 1499 Pfam Myosin head (motor domain) 64 724 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 Gene3D Kinesin motor domain 65 666 IPR036961 -
Chy06g00415 1499 CDD MyosinXI_CBD 1101 1468 IPR037975 GO:0007015
Chy06g00415 1499 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Chy06g00415 1499 ProSiteProfiles Dilute domain profile. 1150 1445 IPR002710 -
Chy06g00415 1499 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 Gene3D Myosin VI head, motor domain, U50 subdomain 316 605 - -
Chy06g00415 1499 ProSiteProfiles Myosin motor domain profile. 62 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Chy06g00415 1499 CDD MYSc_Myo11 76 724 IPR036018 -
Chy06g00415 1499 Coils Coil 920 954 - -
Chy06g00415 1499 ProSiteProfiles IQ motif profile. 812 839 IPR000048 GO:0005515
Chy06g00415 1499 Coils Coil 976 1010 - -
Chy06g00415 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 790 IPR027417 -
Chy06g00415 1499 Coils Coil 895 915 - -
Chy06g00415 1499 SMART MYSc_2a 56 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 Gene3D - 670 737 - -
Chy06g00415 1499 PANTHER MYOSIN-7 6 1497 - -
Chy06g00415 1499 ProSiteProfiles IQ motif profile. 762 791 IPR000048 GO:0005515
Chy06g00415 1499 Pfam IQ calmodulin-binding motif 836 851 IPR000048 GO:0005515
Chy06g00415 1499 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Chy06g00415 1499 Pfam IQ calmodulin-binding motif 859 879 IPR000048 GO:0005515
Chy06g00415 1499 Pfam IQ calmodulin-binding motif 765 782 IPR000048 GO:0005515
Chy06g00415 1499 Gene3D - 256 314 - -
Chy06g00415 1499 SMART iq_5 857 879 IPR000048 GO:0005515
Chy06g00415 1499 SMART iq_5 834 856 IPR000048 GO:0005515
Chy06g00415 1499 SMART iq_5 786 808 IPR000048 GO:0005515
Chy06g00415 1499 SMART iq_5 809 831 IPR000048 GO:0005515
Chy06g00415 1499 SMART iq_5 738 760 IPR000048 GO:0005515
Chy06g00415 1499 SMART iq_5 761 783 IPR000048 GO:0005515
Chy06g00415 1499 Coils Coil 1018 1052 - -
Chy06g00415 1499 Pfam DIL domain 1321 1424 IPR002710 -
Chy06g00415 1499 Gene3D - 837 886 - -
Chy06g00415 1499 Gene3D - 788 836 - -
Chy06g00415 1499 Gene3D - 739 787 - -
Chy06g00415 1499 PRINTS Myosin heavy chain signature 486 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 PRINTS Myosin heavy chain signature 433 461 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy06g00415 1499 SMART DIL_2 1320 1427 IPR002710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00415 Chy-Chr6:2806607 Chy11g01878 Chy-Chr11:24995218 0 dispersed
Chy11g00998 Chy-Chr11:14119184 Chy06g00415 Chy-Chr6:2806607 9.76E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00415 K10357 - csv:101221506 2902.46