Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00476 ATGGCAAGAGAGCAACTACAAGTATTGAATGCACTTGATGTAGCCAAAACACAATGGTATCATTTCACAGCCATTGTAATAGCCGGAATGGGGTTTTTCACCGATGCCTATGATCTCTTTTGCGTATCTCTCGTTACCAAACTTTTGGGTCGAATTTACTTTCACAAAGAAGGCTCAGACAAGCCCGGTGAATTGCCTTCAAACATAGCCGCTGCTATAAACGGCGTCGCTTTCTGCGGAACCCTCTCTGGCCAACTCTTCTTCGGATGGCTCGGTGACAAAATGGGCCGCAAACGAGTCTACGGAATGACGCTTATGCTTATGGTCATTTGCTCTGTAGCATCAGGCTTGTCTTTCAGCAGCACCCCAACGTCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTTGGGTTTGGCATCGGTGGCGATTACCCACTTTCCGCCACCATCATGTCGGAATATGCCAATAAAAGAACGCGAGGGGCTTTCATCGCTGCTGTGTTTGCAATGCAGGGGTTTGGGATTTTGGCTGGTGGGGTGGTTGCAATTATTGTCTCCTCTGCGTTTGATGCTAAATACCCAGCTCCGTCGTATCAGGAAAATCCCACCGCCTCCACTGTCCCACAGGCGGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCTTTTCCGGCTCTTCTCACTTATTATTGGCGAATGAAAATGCCGGAAACTGCTCGTTATACCGCCTTGGTTGCTAAAAATGCAAAACAGGCAGCCGCCGACATGTCTAAAGTTTTGCAGGTGGAATTGGAATCGGAGCAGGAAAAGATTGACGAGGGAATATCGAAAAACGATTTTGGGTTGTTCACAATGAGTTTTCTCCGTCGACATGGGTTACATTTGTTGGGGACTACCTCTACTTGGTTCTTGTTGGACATAGCATTTTACAGTCAAAATCTCTTTCAGAAAGACATTTTCACTGCCATTGGTTGGCTTCCTCCGGCAAAGACAATGAACGCCGTTGAAGAAGTTTTCAGAATCGCTAGAGCTCAAACTCTCATCGCATTATGCAGTACAGTTCCAGGGTATTGGTTCACTGTAGCGCTCATCGACATAATGGGACGATTTGCAATTCAATTGATGGGATTTTTCTTCATGACGGTGTTCATGTTCGCATTGGCTATTCCTTACCATCATTGGACATTAGAAGCCAACAGAATCGGGTTTGTTGTAATGTATTCACTAACGTTCTTCTTCGCGAATTTCGGGCCAAATGCGACGACTTTCGTGGTTCCGGCAGAGATATTTCCAGCAAGACTCCGGTCGACGTGCCACGGAATATCAGCTGCATCGGGAAAAGCAGGGGCAATTGTTGGGGCATTTGGATTTCAGTATGCGGAAAAAGGGTTTGGAGTGAAGAAGACACTGATAATTCTAGGGGTTGTGAATGCTCTTGGGATGTTCTTCACTTTGTTGGTTCCTGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCTGGTGAAGGTGGAGATGATGAGGCTCAGAGCACAATAGAGTCAAGAACTGTGCCTGTTTGA 1560 46.28 MAREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYFHKEGSDKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSSAFDAKYPAPSYQENPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGISKNDFGLFTMSFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAVEEVFRIARAQTLIALCSTVPGYWFTVALIDIMGRFAIQLMGFFFMTVFMFALAIPYHHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGFGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEGGDDEAQSTIESRTVPV* 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3178352 3179911 - Chy6G110040.1 Chy06g00476 228185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00476 519 SUPERFAMILY MFS general substrate transporter 12 500 IPR036259 -
Chy06g00476 519 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 512 - -
Chy06g00476 519 Pfam Sugar (and other) transporter 25 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Chy06g00476 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 493 IPR020846 GO:0022857
Chy06g00476 519 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 512 - -
Chy06g00476 519 TIGRFAM 2A0109: phosphate:H+ symporter 11 502 IPR004738 GO:0005315|GO:0006817|GO:0016021
Chy06g00476 519 MobiDBLite consensus disorder prediction 495 519 - -
Chy06g00476 519 Gene3D MFS general substrate transporter like domains 271 517 IPR036259 -
Chy06g00476 519 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Chy06g00476 519 CDD MFS_PhT 25 492 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00324 Chy06g00476 CCT
Chy05g00324 Chy06g00476 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00476 Chy-Chr6:3178352 Chy02g00316 Chy-Chr2:2054783 3.82E-11 dispersed
Chy06g00476 Chy-Chr6:3178352 Chy06g00477 Chy-Chr6:3190573 0 tandem
Chy04g01095 Chy-Chr4:16870346 Chy06g00476 Chy-Chr6:3178352 0 transposed
Chy06g01267 Chy-Chr6:11633708 Chy06g00476 Chy-Chr6:3178352 0 transposed
Chy07g00422 Chy-Chr7:3280753 Chy06g00476 Chy-Chr6:3178352 0 transposed
Chy05g00324 Chy-Chr5:3253657 Chy06g00476 Chy-Chr6:3178352 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00476 K08176 - csv:101209582 1010.36