Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00477 ATGACACAAGAGTTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACTCAATGGTACCATTTCACAGCCATCATCATAGCCGGCATGGGGTTCTTCACGGACGCCTATGATCTTTTCTGCATCGCGGTGGTGTCGAAGTTGCTCGGTCGGATATACTACTACACGCCGGGGTCCAATCGGCCAGGGTCACTTCCTCCAAACGTCTCGGCAGCAGTGAGTGGGGTGGCTCTATGTGGAACACTGGCGGGGCAGTTGTTCTTCGGGTGGCTAGGTGACAAGATGGGGAGGAAGAAAGTGTATGGGATAACATTGATACTGATGGTGGTATGTTCATTTGGGTCGGGGCTAAGTTTTGGGCATTCGGCAAAAGCAACAATGACCACTTTATGTTTGTTTCGGTTCTGGCTTGGGTTTGGGATTGGGGGCGATTACCCACTTTCGGCTACAATCATGTCTGAATATGCTAATAAGAAAACACGAGGGGCTTTTATAGCTGCTGTTTTCGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGAATCGTCGCGTTGATTGTTTCAGCTGCATTCAACAACAGATTCTCAGCACCTTCATACGAGACTGACCCAGTGGGATCAACTGTACCGGAGGCAGACTACGTATGGCGCGTTGTTCTAATGTTTGGCGCCATCCCCGCAGGAATGACATACTATTGGCGTATGAAGATGCCTGAAACGGCCCGTTACACCGCTCTAGTAGCAAAGAACGCCAAACAAGCTGCAGCGGACATGTCGAAAGTGTTACAAGTAGTGGTTGAGGCAGAAGAAGAGAAGTTAGAAAAAATAGTAAACACAAACAAAAACAACTTCGGCTTGTTTTCAAGACAATTCCTCAAACGCCATGGCCTCCACTTGGTTGGAACCACAAGCACTTGGTTCTTATTAGACATTGCATTTTATAGCCAAAACCTTTTCCAGAAAGACATATTCACTGCAATAGGTTGGCTCCCTCCCGCTAAAACCATGAGCGCTCTTGAAGAGTGCTTTCGTATCGCTAGGGCGCAAACGCTCATTGCACTTTGTGGGACCGTGCCAGGCTATTGGTTCACTGTGGCTTTGATTGATATCATCGGTAGATTCACCATCCAATTAATTGGGTTCATTATGATGACGATTTTCATGTTTGCTATTGCCTTCCCTTACAACCATTGGATTTTAAAAGAGAATCGAATTGGGTTTTTGGTCATGTATTCCTTAACATTTTTCTTCGCAAATTTTGGGCCGAACTCCACTACTTTCATCGTTCCGGCTGAAATCTTTCCGGCTAGGCTAAGATCCACGTGTCACGGGATCTCCGCTGCCGCCGGTAAAGCTGGAGCAATTGTTGGTGCTTTCGGGTTCTTGTATGCAGCACAAAATCCTGACCGAACAAAAACAGACCTAGGGTATCCACCGGGTATTGGTGTTAAGAACTCTCTCATTGCACTTGGTTGCATCAATTTCCTCGGTAGTGTGCTTACCTTGTTGGTACCGGAACCTAAAGGAAAATCGCTTGAGGAGTTGACCGGAGAAAATGAGGGGCCGGATGTAGAAGCCGTTGGCCAACAACAAGTGTGA 1593 47.02 MTQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSNRPGSLPPNVSAAVSGVALCGTLAGQLFFGWLGDKMGRKKVYGITLILMVVCSFGSGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFSAPSYETDPVGSTVPEADYVWRVVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVVVEAEEEKLEKIVNTNKNNFGLFSRQFLKRHGLHLVGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMSALEECFRIARAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAFPYNHWILKENRIGFLVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNPDRTKTDLGYPPGIGVKNSLIALGCINFLGSVLTLLVPEPKGKSLEELTGENEGPDVEAVGQQQV* 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3190573 3192530 - Chy6G110050.1 Chy06g00477 228186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00477 530 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Chy06g00477 530 CDD MFS_PhT 24 506 - -
Chy06g00477 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Chy06g00477 530 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 523 - -
Chy06g00477 530 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Chy06g00477 530 TIGRFAM 2A0109: phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Chy06g00477 530 Coils Coil 249 269 - -
Chy06g00477 530 MobiDBLite consensus disorder prediction 510 530 - -
Chy06g00477 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Chy06g00477 530 Gene3D MFS general substrate transporter like domains 270 528 IPR036259 -
Chy06g00477 530 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01095 Chy-Chr4:16870346 Chy06g00477 Chy-Chr6:3190573 0 dispersed
Chy05g00324 Chy-Chr5:3253657 Chy06g00477 Chy-Chr6:3190573 0 dispersed
Chy06g00477 Chy-Chr6:3190573 Chy06g01267 Chy-Chr6:11633708 0 dispersed
Chy06g00476 Chy-Chr6:3178352 Chy06g00477 Chy-Chr6:3190573 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00477 K08176 - csv:101213007 1028.85