Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g00495 | ATGAAACTTTCTCGTCTTAATTCCCTCCGCCGAGTCCAGTCCGGTGAGCTTATCGTGAAGCACCCCGACGACCACGATGATTCCAAACGGCCTCAATTTCCTCTTGATTCCACCTCTTACAAAATCATCGACGAAATTGGTGTCGGTGTCAGCGCCGTCGTGTATAAAGCCATCTGCATTCCTATGAACTCTGCAGTTGTGGCCATCAAAGCCATTGACCTCGATCGATCACGAGCGGATTTCGACGACATCCGAAGAGAAGCCAAAATTCTCTCACTTCTCTCTCACCCCAACATTCTAAATTCTCATTGCTCTTTCACCGTCGATCGTCGTCTTTGGGTCGTCATGCCGTTCATGTCCGCTGGATCTTTACAGTCCATTATTACGTCCTCGTTTCCCGATGGCTTGCCGGAGCCCTGCATTGCCATTGTTCTTCGGGAAATTCTGCACGCTCTTTCTTACCTCCACGACCAAGGCCATCTCCACCGCGATATTAAAGCCGGCAACATTCTTATAGACTCAAATGGGTCGATCAAGCTTGCTGATTTTGGAGTTTCCACGTCGATTTTCGAGTCGAATTCAAAACAGGGGATGTCGATTTCTCCATTGTCGACGTCTATGATGCTGAAGGAAGTCGCCGGAACGCCATATTGGATGGCACCGGAGGTGATTCACTCGCACAATGGGTATAGTTTGAAAGCAGATATATGGTCTTTTGGAATCACAGCGTTGGAATTAGCCCATGGACGACCTCCCCTATCTCATCTCCCTCCTTCCAAATCCCTGCTTCTGAAAATCACGCGGAGGTTTCGATTCTCCGATTATGAGAATCACCATAACAGCAAAAACAAGAACAAATTCTCAAAAGGGTTTAAGGAATTGGTAGCGTCTTGCCTGGATCCGGAGCCATCGAGAAGACCCTGCGCTGAGAAATTGCTCAAACATCCATTCTTCAAAAACAGCAAGGGGCCTGATCTTCTCGTAAAAACTATATTACAAGGATTGCCGAGCGTCGAAGAGCGATTCAAATTGGGTAAATTACAGCGATTGCCGTCGATGAAAACCGAGGAAGAAGAGGAAGAAGAATTAGAGAAAGAGATTATAAAACAGAGGAGGATAAGTGGGTGGAATTTCAATGAAGATGGGTTAGAGCTAGACCCTGTTTTTCCAGGGGAAGAATGTTCGATCATGGAGGAGAAGGGTTCGGGGAATTCGAGCGAGTGCTGTTCGGGGCTGTCGGATCTGAGTTCACCAGGGGGGAATGAGAGGGGCGGCGGCAGCAGCGGGGGTGGAGGGGAGGAGGAGGTTGTTGACAGAGAATCGATAGTGGGAGGATTGATGGCGCTGAAAAGGAGCTTAGATGAACAGAGAAGGGCGGTGGGAAGTTTGATAGAATTGATGGAAGGGGAAAAAGTGGGAGAGATGAGCAGAGAGGAGCAAATGGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGAGGAGGAGGAACTTTGAATTAGAGATGGAGTTGGAATTTCTTAGGCTTCAAATTTCTGCTGTTCATAATAATAACGATGGTGGTGCTTCGACCGCCATCAACAACTGA | 1593 | 47.83 | MKLSRLNSLRRVQSGELIVKHPDDHDDSKRPQFPLDSTSYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNSHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAIVLREILHALSYLHDQGHLHRDIKAGNILIDSNGSIKLADFGVSTSIFESNSKQGMSISPLSTSMMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENHHNSKNKNKFSKGFKELVASCLDPEPSRRPCAEKLLKHPFFKNSKGPDLLVKTILQGLPSVEERFKLGKLQRLPSMKTEEEEEEELEKEIIKQRRISGWNFNEDGLELDPVFPGEECSIMEEKGSGNSSECCSGLSDLSSPGGNERGGGSSGGGGEEEVVDRESIVGGLMALKRSLDEQRRAVGSLIELMEGEKVGEMSREEQMGRLMEKMTRELENERRRNFELEMELEFLRLQISAVHNNNDGGASTAINN* | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3358171 | 3359763 | - | Chy6G110230.1 | Chy06g00495 | 228204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g00495 | 530 | Gene3D | Phosphorylase Kinase; domain 1 | 29 | 118 | - | - | |
Chy06g00495 | 530 | SMART | serkin_6 | 40 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00495 | 530 | MobiDBLite | consensus disorder prediction | 398 | 434 | - | - | |
Chy06g00495 | 530 | Pfam | Protein kinase domain | 40 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00495 | 530 | Coils | Coil | 478 | 512 | - | - | |
Chy06g00495 | 530 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BLUS1 | 24 | 520 | - | - | |
Chy06g00495 | 530 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 24 | 520 | - | - | |
Chy06g00495 | 530 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 335 | IPR011009 | - | |
Chy06g00495 | 530 | MobiDBLite | consensus disorder prediction | 399 | 423 | - | - | |
Chy06g00495 | 530 | ProSiteProfiles | Protein kinase domain profile. | 40 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g00495 | 530 | Coils | Coil | 353 | 373 | - | - | |
Chy06g00495 | 530 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 70 | IPR017441 | GO:0005524 | |
Chy06g00495 | 530 | Gene3D | Transferase(Phosphotransferase) domain 1 | 122 | 371 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy05g00345 | Chy06g00495 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00495 | Chy-Chr6:3358171 | Chy07g00059 | Chy-Chr7:518162 | 1.05E-57 | dispersed | |
Chy04g01331 | Chy-Chr4:19856048 | Chy06g00495 | Chy-Chr6:3358171 | 1.50E-105 | transposed | |
Chy06g02217 | Chy-Chr6:26332925 | Chy06g00495 | Chy-Chr6:3358171 | 8.34E-107 | transposed | |
Chy09g00338 | Chy-Chr9:2955913 | Chy06g00495 | Chy-Chr6:3358171 | 1.85E-109 | transposed | |
Chy05g00345 | Chy-Chr5:3557828 | Chy06g00495 | Chy-Chr6:3358171 | 9.22E-70 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71312 | PF00069 | Pkinase | 1.20E-59 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g00495 | K08835 | - | csv:101215648 | 923.694 |