Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00495 ATGAAACTTTCTCGTCTTAATTCCCTCCGCCGAGTCCAGTCCGGTGAGCTTATCGTGAAGCACCCCGACGACCACGATGATTCCAAACGGCCTCAATTTCCTCTTGATTCCACCTCTTACAAAATCATCGACGAAATTGGTGTCGGTGTCAGCGCCGTCGTGTATAAAGCCATCTGCATTCCTATGAACTCTGCAGTTGTGGCCATCAAAGCCATTGACCTCGATCGATCACGAGCGGATTTCGACGACATCCGAAGAGAAGCCAAAATTCTCTCACTTCTCTCTCACCCCAACATTCTAAATTCTCATTGCTCTTTCACCGTCGATCGTCGTCTTTGGGTCGTCATGCCGTTCATGTCCGCTGGATCTTTACAGTCCATTATTACGTCCTCGTTTCCCGATGGCTTGCCGGAGCCCTGCATTGCCATTGTTCTTCGGGAAATTCTGCACGCTCTTTCTTACCTCCACGACCAAGGCCATCTCCACCGCGATATTAAAGCCGGCAACATTCTTATAGACTCAAATGGGTCGATCAAGCTTGCTGATTTTGGAGTTTCCACGTCGATTTTCGAGTCGAATTCAAAACAGGGGATGTCGATTTCTCCATTGTCGACGTCTATGATGCTGAAGGAAGTCGCCGGAACGCCATATTGGATGGCACCGGAGGTGATTCACTCGCACAATGGGTATAGTTTGAAAGCAGATATATGGTCTTTTGGAATCACAGCGTTGGAATTAGCCCATGGACGACCTCCCCTATCTCATCTCCCTCCTTCCAAATCCCTGCTTCTGAAAATCACGCGGAGGTTTCGATTCTCCGATTATGAGAATCACCATAACAGCAAAAACAAGAACAAATTCTCAAAAGGGTTTAAGGAATTGGTAGCGTCTTGCCTGGATCCGGAGCCATCGAGAAGACCCTGCGCTGAGAAATTGCTCAAACATCCATTCTTCAAAAACAGCAAGGGGCCTGATCTTCTCGTAAAAACTATATTACAAGGATTGCCGAGCGTCGAAGAGCGATTCAAATTGGGTAAATTACAGCGATTGCCGTCGATGAAAACCGAGGAAGAAGAGGAAGAAGAATTAGAGAAAGAGATTATAAAACAGAGGAGGATAAGTGGGTGGAATTTCAATGAAGATGGGTTAGAGCTAGACCCTGTTTTTCCAGGGGAAGAATGTTCGATCATGGAGGAGAAGGGTTCGGGGAATTCGAGCGAGTGCTGTTCGGGGCTGTCGGATCTGAGTTCACCAGGGGGGAATGAGAGGGGCGGCGGCAGCAGCGGGGGTGGAGGGGAGGAGGAGGTTGTTGACAGAGAATCGATAGTGGGAGGATTGATGGCGCTGAAAAGGAGCTTAGATGAACAGAGAAGGGCGGTGGGAAGTTTGATAGAATTGATGGAAGGGGAAAAAGTGGGAGAGATGAGCAGAGAGGAGCAAATGGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGAGGAGGAGGAACTTTGAATTAGAGATGGAGTTGGAATTTCTTAGGCTTCAAATTTCTGCTGTTCATAATAATAACGATGGTGGTGCTTCGACCGCCATCAACAACTGA 1593 47.83 MKLSRLNSLRRVQSGELIVKHPDDHDDSKRPQFPLDSTSYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNSHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAIVLREILHALSYLHDQGHLHRDIKAGNILIDSNGSIKLADFGVSTSIFESNSKQGMSISPLSTSMMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENHHNSKNKNKFSKGFKELVASCLDPEPSRRPCAEKLLKHPFFKNSKGPDLLVKTILQGLPSVEERFKLGKLQRLPSMKTEEEEEEELEKEIIKQRRISGWNFNEDGLELDPVFPGEECSIMEEKGSGNSSECCSGLSDLSSPGGNERGGGSSGGGGEEEVVDRESIVGGLMALKRSLDEQRRAVGSLIELMEGEKVGEMSREEQMGRLMEKMTRELENERRRNFELEMELEFLRLQISAVHNNNDGGASTAINN* 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3358171 3359763 - Chy6G110230.1 Chy06g00495 228204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00495 530 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Chy06g00495 530 SMART serkin_6 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00495 530 MobiDBLite consensus disorder prediction 398 434 - -
Chy06g00495 530 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00495 530 Coils Coil 478 512 - -
Chy06g00495 530 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 24 520 - -
Chy06g00495 530 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 24 520 - -
Chy06g00495 530 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Chy06g00495 530 MobiDBLite consensus disorder prediction 399 423 - -
Chy06g00495 530 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00495 530 Coils Coil 353 373 - -
Chy06g00495 530 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Chy06g00495 530 Gene3D Transferase(Phosphotransferase) domain 1 122 371 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00345 Chy06g00495 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00495 Chy-Chr6:3358171 Chy07g00059 Chy-Chr7:518162 1.05E-57 dispersed
Chy04g01331 Chy-Chr4:19856048 Chy06g00495 Chy-Chr6:3358171 1.50E-105 transposed
Chy06g02217 Chy-Chr6:26332925 Chy06g00495 Chy-Chr6:3358171 8.34E-107 transposed
Chy09g00338 Chy-Chr9:2955913 Chy06g00495 Chy-Chr6:3358171 1.85E-109 transposed
Chy05g00345 Chy-Chr5:3557828 Chy06g00495 Chy-Chr6:3358171 9.22E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71312 PF00069 Pkinase 1.20E-59 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00495 K08835 - csv:101215648 923.694