Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00525 ATGGACACGGGGCTCCGGCCCACTCCCGCCCCCGCCCCCGCCCCCGCTACTACTCTTCTTGGGAAGTACCAATTAGGCCGCCTTCTCGGTCGTGGAAGTTTCGCCAAAGTCTATCAAGCAGTTTCCTTAGCCGATAACTCCACCGTCGCCATCAAAATCATCGACAAATCCAAAACCATCGGCGCTGCCATGGAACGTTGCATAGTCCGGGAGGTTTCCGCCATGCGCCGCCTCGATCACCATCCAAACATACTCAAAATCCACGAAGTCATGGCGACAAAGTCCAAAATATACCTCGTGGTTGAATTCGCTGGCGGTGGCGAACTCTTGGCTAAAATCTCCCGCCGTGGGCGATTCACCGAAACCGTTGCGCGCCGGTATTTCCAACAACTCGTCTCGGCCCTTAAGTTCTGCCACGACAACGGCGTCGTTCACCGTGACGTGAAGCCGCAGAATCTTTTGCTGGACGAACAGGGCAATCTGAAAATCTCTGATTTCGGTCTCTCTGCTTTACCTGAACAACTCAGAGACGGATTACTCCACACGTCTTGTGGAACTCCAGCGTACTCAGCGCCAGAAGTCATGACATGTCGCAGTGCTGGAGGATACGACGGCGGAAAGGCTGACGCCTGGTCATGTGGAGTAATTTTATTTGTAATGCTCTCTGGGTGTCTCCCTTTCGACGACAGTAATCTAGCGGCGATGTACAGAAAAATCCACAGGCGAGAATTTCAAATCCCTAATTGGGTATCGAAACCTGTCCGATTCCTAATATATCACCTCCTCGATCCGAATCCCAAAACGAGGATGAGCATTGAGGCGTTAATGCAAAACCCCTGGTTCAAGAAATCGTTGCAGTTGAAACAGGGCAATGAGAACCTACTGCAATCGATGAGGGATTATCGAATGGGAAAAGAGAGAGGAATTGGGGAAATGAATGCGTTCGATATAATTTCGATGTCTTCGGGGTTGGATTTATCGGGGCTGTTTGAAACGACGGAGAGGAGGGCGGAGAGGAGGTATGCGTCGAGGGCGAGGGTGATGGAGGTGGAGAAGAGGGTCAGGGAGATGGGCGTAGAGTTGGAGTATGAAGTGGAGGTGGGGGGGAAGGGAGGGTCGATCGGAATGGGGAAGAGGGGAGTGGTGGTGGTGGTGGAAGTGGTGGAGGTTGCAGTGGATTTAACGATGGTGGAGGTGAGGGTGGTGAAAGGAGGGGAGGAGTTTGAAGAACACCATTGGAGGTGTTTTGAAGGTAAACTTGAAGGATTTGCAGTTCCATGGCAGAGGAAATGTAATTTGTAA 1302 51.84 MDTGLRPTPAPAPAPATTLLGKYQLGRLLGRGSFAKVYQAVSLADNSTVAIKIIDKSKTIGAAMERCIVREVSAMRRLDHHPNILKIHEVMATKSKIYLVVEFAGGGELLAKISRRGRFTETVARRYFQQLVSALKFCHDNGVVHRDVKPQNLLLDEQGNLKISDFGLSALPEQLRDGLLHTSCGTPAYSAPEVMTCRSAGGYDGGKADAWSCGVILFVMLSGCLPFDDSNLAAMYRKIHRREFQIPNWVSKPVRFLIYHLLDPNPKTRMSIEALMQNPWFKKSLQLKQGNENLLQSMRDYRMGKERGIGEMNAFDIISMSSGLDLSGLFETTERRAERRYASRARVMEVEKRVREMGVELEYEVEVGGKGGSIGMGKRGVVVVVEVVEVAVDLTMVEVRVVKGGEEFEEHHWRCFEGKLEGFAVPWQRKCNL* 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3562906 3564207 - Chy6G110530.1 Chy06g00525 228234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00525 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Chy06g00525 433 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Chy06g00525 433 PANTHER SERINE/THREONINE KINASE 15 429 - -
Chy06g00525 433 SUPERFAMILY Protein kinase-like (PK-like) 20 289 IPR011009 -
Chy06g00525 433 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Chy06g00525 433 Pfam NAF domain 312 366 IPR004041 GO:0007165
Chy06g00525 433 Pfam Protein kinase domain 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00525 433 SMART serkin_6 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00525 433 ProSiteProfiles Protein kinase domain profile. 23 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00525 433 Gene3D Kinase associated domain 1, KA1 308 423 - -
Chy06g00525 433 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 429 - -
Chy06g00525 433 Gene3D Transferase(Phosphotransferase) domain 1 107 305 - -
Chy06g00525 433 Gene3D Phosphorylase Kinase; domain 1 19 106 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy05g00369 Chy06g00525 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02423 Chy-Chr2:27922775 Chy06g00525 Chy-Chr6:3562906 1.31E-10 dispersed
Chy06g00525 Chy-Chr6:3562906 Chy11g01388 Chy-Chr11:20292311 2.11E-125 dispersed
Chy09g00649 Chy-Chr9:8371187 Chy06g00525 Chy-Chr6:3562906 1.33E-09 transposed
Chy05g00369 Chy-Chr5:3929425 Chy06g00525 Chy-Chr6:3562906 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71314 PF00069 Pkinase 1.80E-69 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00525 K12761 - csv:101217555 767.303