Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00536 ATGCCAGTACGGCAAATGAAAGAGAGCTCCGAGCAGCATCTTGTAATCAAAACCCACTTGCAGAACACTGTTCAAAAAGCTCCAAAATCAACCCAAAATGGCAAAGGTCCGCCGAATCTGGAACACCAGAACATCAAATTTCGAAACCCATCTTCCCCTCCGAGTAAAAACAGGGGTCGGAGAAGGAGCAGAGGTGGTCGGAAATCCGATCAGGGAGATGTGTTTATGAGGCCCAGTTCTCGGCCCTGCACGGTGGCACGTAAACCCGATGAACCGGAGTTTAACGCCGGAGCTCTGGTGGCGAGTACTAATCCAAATGGTGAAATCATTAGTGGGATGCAAATGGGTTTTCGTAATTCAAGCAAGTCTTTGAGTTTTGCCCCAAGGCCTGGATTTGGTCAAGTTGGAACAAAGTGTATTGTAAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATTTGGGAAAAAGATTACCAGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTATGGAAAGAGTTTACCATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAATATAAAGTACTTATTAAGTTCGTTGCACGTGCAAATTTACACCATCTGGGTCAGTTTCTGGCGGGCAAGCGTGCTGATGCTCCACAAGAAGCTCTTCAGATACTGGACATTGTATTGAGAGAGCTTTCATCTAAAAGGGGGTACTGTCCTATAGGGAGATCTTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTAGAATCATGGTGTGGATTTTATCAGAGTATTAGACCTACTCAAATGGGACTGTCTCTAAACATTGGTAAATTGGAACATACAATTAAAGCTTTGTACTATGATTTGCGCATATTTGACCTTAGGTGA 1035 43.77 MPVRQMKESSEQHLVIKTHLQNTVQKAPKSTQNGKGPPNLEHQNIKFRNPSSPPSKNRGRRRSRGGRKSDQGDVFMRPSSRPCTVARKPDEPEFNAGALVASTNPNGEIISGMQMGFRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFTIKLVDEEDGVSGPKREREYKVLIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRGYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIGKLEHTIKALYYDLRIFDLR* 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3650919 3652613 + Chy6G110640.1 Chy06g00536 228245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00536 344 Pfam N-terminal domain of argonaute 138 272 IPR032474 -
Chy06g00536 344 PANTHER PROTEIN ARGONAUTE 10 57 324 - -
Chy06g00536 344 SUPERFAMILY PAZ domain 140 325 IPR036085 GO:0005515
Chy06g00536 344 Pfam Argonaute linker 1 domain 283 324 IPR014811 -
Chy06g00536 344 MobiDBLite consensus disorder prediction 21 90 - -
Chy06g00536 344 SMART DUF1785_2 282 337 IPR014811 -
Chy06g00536 344 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 324 - -
Chy06g00536 344 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00536 Chy-Chr6:3650919 Chy12g01567 Chy-Chr12:19234555 1.17E-98 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00536 K11593 - csv:101221352 608.986