Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00551 ATGGGTAATGCAGATTTTGAATGCCCTCATAGAGTAGCCATTCCTCCTAAGAAGCCCTTCTTAGACTCCTTAGCTTCTAATCTCAAAGAAACCTTCTTCCCTGATGACCCTTTCAAACAATTCAAAAACCAACCTTTACCCACTCAGATCTTTCTATGGCTTAAATACTTCATCCCCATCCTCAATTGGGCTCCTCATTACACTTTGGACTTCTTTAAAGCTGACCTTGTTGCTGGTATCACCATCGCTAGTTTAGCTGTCCCTCAGGGTATTAGCTATGCTAATCTCGCTAGCATTCCTCCTATCATCGGACTTTGTAAGTTTTTACACTACAACACACATTCGAGTTTCGTACCTCCGTTGATATACGCCATGCTTGGAAGCTCGAAAGATATAGCGGTGGGGACAGTGGCGGTAGCATCGTTGCTTATGTCTGCCATGTTGGGGAAGGAAGTCAACCCCGTGGAGCATCCGAAGGAATATGTTCAATTGGTTTTTACTGCAACTTTCTTCGCAGGAGTTTTTCAAGCTTCTCTTGGATTTCTAAGATTGGGGCTTATTGTGGACTTTTTGTCACATGCAACAATAGTAGGGTTCATGGGTGGTGCAGCAACGGTGGTCTGTCTTCAGCAATTAAAAGGCATAACTGGATTGGTTCATTTTACACATGAGACTGATATTGTATCCGTTATGCGCTCTCTTTTTACTCAAGTCCACAAGTGGAGATGGGAAAGTATTGTATTGGGTTGTTGTTTTCTCTTCTTTCTCCTCCTCACAAGATATTTGAGCAAGAAGAAATCAATCTTCTTTTGGATAAGTGCATTGGCGCCTTTGACTTCGGTAATCTTGGGAAGTCTTCTCGTTTACTTAACCCACGCTGAAAAACATGGCGTTCAAGTGATTGGGAGTTTGAAGAAAGGGTTGAATCCCCCTTCTGCATCTGATTTAGTATTTGGATCCCCTCATCTCGCCATTACTATCAAAACAGGGATCATCATCGGAATCATAGGCCTCGCTGAAGGGGTTGCAGTGGGAAGAAGTTTTGCTGCATTTAAGAATTACCACATTGATGGAAACAAGGAGATGATAGCATTTGGGATGATGAACATTATTGGTTCTTGCACTTCTTGCTACCTTACTGCAGGCCCTTTCTCGAGGACTGCAGTGAATTTCAATGCAGGATGTAAAACTGCGGTTTCGAATATTGTCATGGCAATTGCTCTGATGATCACTCTGTTGTTTTTGACGCCATTTTTTCACTATACACCCCTGGTGGTGCTTTCTGCCATAATCATCACTGCTATGCTTGGCCTAATCAATTATGAAGAAGTCATCCACCTTTGGAAAATCGACAAATTTGACTTTGTCGTCTGCCTTGGTGCATATATCGGTGTTGTCTTTGGCAGCGTTGAAACAGGCTTGATCGTTGCGATTACACTCTCTTTGTTAAGGGTGCTTCTCATCATGGCGAGGCCAAGAACTTTAGTACTAGGCAATATTCCCAACTCCACAATTTACAGAAGCGTTGATCAATACCCAACAGCCAACCGTGTACCTGGTATTCTCATCCTTCAATTGGAGGCCCCAATCTACTTTGCCAACTCAAACTACCTAAGAGAAAGGCTTTCAAGGTGGATTACAGACGAAGAAGAGAGGATAAAATCATCAGGAGAAACCAGCTTGCAGTACATAATTCTAGACATTTCCGGTGTAAGTAGCATTGACTCAAGTGGAATCAGCATGCTTGAAGAGCTTAAGAAGACTACTGAAAGAAAGGGTCTCAAACTTGTACTTTGCAATCCAAGAAGTGAAGTGATAAAAAAGTTAAACGAGGCAAAGTTCATCGAGGCGATCGGACAAGAATGGATCTATCTTACAGTGGGAGAGGCTGTAACAGCCTGCAACTTCATGCTCCACACTTGCAAGCCAAATCATGTTGCTGCTGAATTAAATTCACCCGTCTAG 1965 42.75 MGNADFECPHRVAIPPKKPFLDSLASNLKETFFPDDPFKQFKNQPLPTQIFLWLKYFIPILNWAPHYTLDFFKADLVAGITIASLAVPQGISYANLASIPPIIGLCKFLHYNTHSSFVPPLIYAMLGSSKDIAVGTVAVASLLMSAMLGKEVNPVEHPKEYVQLVFTATFFAGVFQASLGFLRLGLIVDFLSHATIVGFMGGAATVVCLQQLKGITGLVHFTHETDIVSVMRSLFTQVHKWRWESIVLGCCFLFFLLLTRYLSKKKSIFFWISALAPLTSVILGSLLVYLTHAEKHGVQVIGSLKKGLNPPSASDLVFGSPHLAITIKTGIIIGIIGLAEGVAVGRSFAAFKNYHIDGNKEMIAFGMMNIIGSCTSCYLTAGPFSRTAVNFNAGCKTAVSNIVMAIALMITLLFLTPFFHYTPLVVLSAIIITAMLGLINYEEVIHLWKIDKFDFVVCLGAYIGVVFGSVETGLIVAITLSLLRVLLIMARPRTLVLGNIPNSTIYRSVDQYPTANRVPGILILQLEAPIYFANSNYLRERLSRWITDEEERIKSSGETSLQYIILDISGVSSIDSSGISMLEELKKTTERKGLKLVLCNPRSEVIKKLNEAKFIEAIGQEWIYLTVGEAVTACNFMLHTCKPNHVAAELNSPV* 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3756750 3761716 + Chy6G110790.1 Chy06g00551 228260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00551 654 Gene3D STAS domain 491 636 IPR036513 -
Chy06g00551 654 PANTHER SULFATE TRANSPORTER 4 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy06g00551 654 Pfam Sulfate permease family 72 459 IPR011547 GO:0016021
Chy06g00551 654 Pfam STAS domain 512 630 IPR002645 -
Chy06g00551 654 TIGRFAM sulP: sulfate permease 59 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy06g00551 654 SUPERFAMILY SpoIIaa-like 514 634 IPR036513 -
Chy06g00551 654 PANTHER BNAA04G05880D PROTEIN 4 649 IPR030311 GO:0008272|GO:0009507|GO:0015116
Chy06g00551 654 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Chy06g00551 654 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01908 Chy-Chr2:22154099 Chy06g00551 Chy-Chr6:3756750 0 dispersed
Chy06g00551 Chy-Chr6:3756750 Chy07g00704 Chy-Chr7:6877474 0 dispersed
Chy01g01556 Chy-Chr1:21486310 Chy06g00551 Chy-Chr6:3756750 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00551 K17471 - csv:101203205 1216.45