Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00612 ATGAAGAAAGAGGGAGATCAAGCCTCCATTATTGGGGGAGTAATAGAGTTCATCAAGGAATTGCATCAAGTATTGCAATCCTTGGAGTCGAATAAACGAAGGAGGAAGAGTATAAGCTCTAGCCCCGGTCCGAGCCCAAAGCCACAGCTGGTGGCTTTGGGATCCGATAATAGCCCGTTTGGATTCGAAAATGGAGTTGACGTCGGAGCATGTTGTAATTCATCGGTTGCAGATGTTGAAGCAAAGATTTCAGGTTCGAACGTGGTTTTGAAGATCATTTCTCGACGGATTCCTGGCCAACTTCCAAAGATGATTGGTGTCTTCGAGAGGCTGTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACCGTTCTATACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAGCTAAGTTTGGAGGAATTAGCTTATGAAGTTCAACAAAGCTTTTGCTCTCAACTTTATTTATGCCAGTGA 489 43.35 MKKEGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISSSPGPSPKPQLVALGSDNSPFGFENGVDVGACCNSSVADVEAKISGSNVVLKIISRRIPGQLPKMIGVFERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAYEVQQSFCSQLYLCQ* 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4162501 4165101 + Chy6G111400.1 Chy06g00612 228321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00612 162 PANTHER TRANSCRIPTION FACTOR FAMA 3 159 IPR044283 GO:0003700|GO:0010052
Chy06g00612 162 PANTHER TRANSCRIPTION FACTOR MUTE 3 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00371 Chy-Chr6:2484401 Chy06g00612 Chy-Chr6:4162501 1.11E-31 dispersed
Chy06g00612 Chy-Chr6:4162501 Chy06g01256 Chy-Chr6:11552370 9.48E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00612 - - csv:101203445 289.656