Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00632 ATGGGTTGTGTTATTGGAAAGTGTTGTACTTCCAGCCATTACCCGCCGTCTACCGACGACGATATCTCACAATTTGGTGATGCCCCACCGTGTAGTTTACATGGAAAGCATATACTAACGGGAAGGTCATTGGAGTCTGTTCGTGTGCCTTCTCATAAATACAATTTGGAGTACTCGCTTTCAACCCAGCGTGGCTACTACCCCGATTCCCCTGATAAAGAAAACCAAGATAATTTATGTGTTAGTACACAAATTCAAGGTAACCCAAATGTTCATATCTTTGGTGTTTTTGATGGTCATGGTCAATTTGGAATGCAGTGCTCGAATTTTGTTAAGGATAGGGTTGTGCAATTACTGTGTAATGACTCTAGATTGTTGGAAGATCCCGTTAAGGCTTATAATTCAGCATTTTTGACTGCGAATGATGAATTGCATAATAGTGAGATTGATGATTCCATGAGTGGTACAACAGCTATTACTGTTCTTGTTATTGGGAATACACTTTATGTTGCGAATGTGGGTGATTCGAGGGCGGTAGTGGCTGTTAAAAATGGGAATCGAATTGTGGCTGAGGATATGTCTCATGATCAAACACCATTTAGGAAGGATGAGTGTGAGAGAGTAAAGCTCGCTGGGGCGAGGGTTTTGACAATTGATCAGATTGAGGGGCTTAGAGATCCGGATATTCAAGTTTGGGGTGATGAGGAGAGTGAGGGAAATGACCCTCCTCGATTGTGGTTTCCTAATAGTTTGTATCCTGGTACTGCGTTTACACGGAGTGTAGGAGACAGTACAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAAGTTTCAGTTGTTCAACTGACTCCAAACCATCTTTTCTTTGTCATTGCAAGCGATGGAGTTTTTGAGTTCCTCACAAGTCAAGCTGTTGTTGATATGGCTGCAAGGTACAGCGATCCACGGGATGCATGCTCTGCTATTGCTGGAGAATCATATAAGATATGGTTGGAGCATGAAAACCGGACGGATGATATAACAATCATCATCGTTCACATCAAAGGCCTCTCTAATTCAGGTGGTTCTGGAACCGTTGGGCTGAATGGGGTCCGCATAAGGCATTCAAATTCAGAGCGGGGAACCTCTGAGATATCGGCTACCACCGGAACTTCAGAGGCCTTTCGCTCCTTCAGAAGTGATTTCTCAGATCTGCACGTCTCTCAGCATGTGGGTTTGATGAACAAAAGCACAGCAATTGTCGTTCCATCGCCTGCGCAGCTCCGACCATTAGAAGTGTGTATTTCTTGGAAACTTCATATCATATTATTGTGTCTGGTAACAGGAAGTGGGATAATGGAGGGTATGCCGTCCCCTCGCTGCTGA 1365 44.32 MGCVIGKCCTSSHYPPSTDDDISQFGDAPPCSLHGKHILTGRSLESVRVPSHKYNLEYSLSTQRGYYPDSPDKENQDNLCVSTQIQGNPNVHIFGVFDGHGQFGMQCSNFVKDRVVQLLCNDSRLLEDPVKAYNSAFLTANDELHNSEIDDSMSGTTAITVLVIGNTLYVANVGDSRAVVAVKNGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLRDPDIQVWGDEESEGNDPPRLWFPNSLYPGTAFTRSVGDSTAEKIGVTAVPEVSVVQLTPNHLFFVIASDGVFEFLTSQAVVDMAARYSDPRDACSAIAGESYKIWLEHENRTDDITIIIVHIKGLSNSGGSGTVGLNGVRIRHSNSERGTSEISATTGTSEAFRSFRSDFSDLHVSQHVGLMNKSTAIVVPSPAQLRPLEVCISWKLHIILLCLVTGSGIMEGMPSPRC* 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4288360 4291156 + Chy6G111600.1 Chy06g00632 228341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00632 454 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Chy06g00632 454 Gene3D - 43 349 IPR036457 -
Chy06g00632 454 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 426 - -
Chy06g00632 454 Pfam Protein phosphatase 2C 82 323 IPR001932 -
Chy06g00632 454 SUPERFAMILY PP2C-like 45 349 IPR036457 -
Chy06g00632 454 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Chy06g00632 454 CDD PP2Cc 73 347 IPR001932 -
Chy06g00632 454 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 426 - -
Chy06g00632 454 SMART PP2C_4 49 345 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00632 Chy11g01447 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01896 Chy-Chr2:21869986 Chy06g00632 Chy-Chr6:4288360 4.27E-138 dispersed
Chy06g00632 Chy-Chr6:4288360 Chy03g00380 Chy-Chr3:5269049 5.06E-25 dispersed
Chy11g01447 Chy-Chr11:21275697 Chy06g00632 Chy-Chr6:4288360 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00632 - - csv:101212684 845.884