Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00655 ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGAGAATCCCGTCCAGAAAGAGGAGGAAGACAGAAGGCAGAAGGCGGAGGAGGAAATTAGGGTTTCTGTGAAGCCGGAGGTTGTTCAGGTTCAGGTTAACAATGCTCGTAATGGTGGAAGTAGGAAGGAGGTTGAAGATGATAGAGGTTCGAGGCAGAGAAGTGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAAACCGCCGAAACATGTGCATGGGGAGCAAGTTGCCGCCGGTTGGCCGTCTTGGCTCTCTGCTGTCGCCGGTGAAGCTATCAATGGATGGATTCCTCGCCGTGCTGACTCTTTTGAGAAGCTTGATAAAATTGGGCAAGGCACGTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAAGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTGAGATTTATGGCCCGAGAGATTCTCATCCTGCGGCGTCTTGATCATCCCAATGTTGTAAAACTTGAAGGTTTGGTGACGTCCCGGATGTCGTGTAGTTTATATCTTGTATTTGAATACATGGAGCATGATTTGGCTGGACTTGCTGCGAGCCCCACAATCAAGTTTACAGAACCGCAGGTTAAATGTTACATGAACCAATTGTTATCAGGGCTTGAACACTGTCACAACCGCTACGTGCTGCATCGTGATATAAAGGGATCAAATCTTCTGATTGGTAATGATGGGATCCTTAAGATAGCGGATTTTGGATTGGCTTCCGTCTTTGATCCCAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGTGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGCTGTTAGCCGGAAAGCCTATAATGCCCGGTCGCACAGAGGTCGAACAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGATGAATACTGGAAAAAGTCAAGGTTGCCTCATGCAACCATATTCAAACCTCAACATTCATACAAGAGATGCATAGCAGAGACATTTAAAGACTTCCCACCATCGTCTCTGCCACTTATCGAGACACTTCTTGCAATCGACCCAGCTGAACGCCTGACCGCCACTTCTGCTTTAAACAGTGAATTTTTCACTACCAAACCATATGCTTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGAAGCAATGTAGATGGGGTGAAGAAATCACGAGCACGTGATCGAGTTGTTCGTGCAATACCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGGCGGCGTCTCATAACACACGCGAATGCGAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACCCTCTAGCATCTTCGCATCACATCGATCCAATCTACGATCCTCCTGATGTTCCATTTAGCACGATGAATTTCTCGTATCCAAAAGCAAACATTCACACATGGTCTGGTCCTTTGATGGACCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGCGACGGCCATTCATCAAAATCATCTAAGGACTTACGAAAAGATAAGAGTTCTGCTCGGATCTAA 1716 47.2 MGCVFGREVSENPVQKEEEDRRQKAEEEIRVSVKPEVVQVQVNNARNGGSRKEVEDDRGSRQRSERRRRPNPRSSKPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRYVLHRDIKGSNLLIGNDGILKIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATSALNSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNVDGVKKSRARDRVVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLASSHHIDPIYDPPDVPFSTMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKSSARI* 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4494701 4498308 - Chy6G111830.1 Chy06g00655 228364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00655 571 PANTHER CELL DIVISION PROTEIN KINASE 57 553 - -
Chy06g00655 571 MobiDBLite consensus disorder prediction 1 85 - -
Chy06g00655 571 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Chy06g00655 571 MobiDBLite consensus disorder prediction 541 571 - -
Chy06g00655 571 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00655 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Chy06g00655 571 SUPERFAMILY Protein kinase-like (PK-like) 106 402 IPR011009 -
Chy06g00655 571 SMART serkin_6 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00655 571 MobiDBLite consensus disorder prediction 531 571 - -
Chy06g00655 571 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00655 571 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Chy06g00655 571 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Chy06g00655 571 PANTHER OS01G0367700 PROTEIN 57 553 - -
Chy06g00655 571 MobiDBLite consensus disorder prediction 11 33 - -
Chy06g00655 571 MobiDBLite consensus disorder prediction 49 64 - -
Chy06g00655 571 MobiDBLite consensus disorder prediction 477 498 - -
Chy06g00655 571 CDD STKc_CDK9_like 113 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01169 Chy-Chr5:16170734 Chy06g00655 Chy-Chr6:4494701 0 dispersed
Chy06g00655 Chy-Chr6:4494701 Chy12g01147 Chy-Chr12:16403329 0 dispersed
Chy06g00655 Chy-Chr6:4494701 Chy02g01127 Chy-Chr2:7980635 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71319 PF00069 Pkinase 5.50E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00655 K08819 - csv:101217952 1083.94