Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00699 ATGCTTCAAGAAGCTTCAACAAAACCCGAGGGAGAACTTGAAGTTAGCTTCGGTTATAAATGCAATGGCAACATAGGTGAAATTCATGATGTTTCTGACAAGTTGGAGATCCAGTCTGGACTTCCAAGGGTCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCGAATGCCACCCTAGCGAACACAAATATATGCAATGGGTTGATAGGAGAAGAAATTCTGCCAACCTGGGATTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCGCCTACTCTTTCAAGGTTGGATATACTGTCAACGTCTCTGCAGAGTAGTCTGTCAAACTTAAGTTGCAGTCCATCTACCCCGACCTCTGATTATGATTCATACTTGTTGAAATCCATGAGTGCTCCATCTGGAGGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCTGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTTAACGGAAGAGATGCTGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAATCTACTAGATTGGGAAGCCAAGAATGAAACCTCTGACGGTTTAGACATGGATGGTTCACATCTTCTTGATGATAGTAACATTACTCAAGGAAGATTTTCTCCTTTGGGAAACAATAGTAAAATTACTTCCGATATCCACAATGTGTTAGACAACCATTCATATGCCAAAGCAGGAATGAAAAACTACCCTCTAAGGCATGGGGTGTTCGATAGCCTCCAGCGTGCTCTTAGTCAAACAGAGAATGATTTTCTGCACATGGTAGAACAGGAAATGGAGGACCGCCCTGATTTAGTTTCTGTTGGGTCATGTGTTTTAGTTGTCCTTCTTCATGGAAAGGATTTGTATACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGATGAGGGTTCTATGAGAAGGAACAGGGGTCTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCTCAGTTACAACATGATCATCCTGATGATCCGACAATAATCGTTGGTGGCAAAGTCAAAGGAAAACTGAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGACGAAAAAATTTAATGATGCTTTGATGGGTATTCTTCGAGTTCGTAACCTAATAAGCCCTCCCTATATTTCCACTCAACCAGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTATTTGACTTTTTTGGCAATGAGGAGGCAGTGAACCTTGTCCATTCGTATATCTTGAGCAACCCAACTGGTGATCCTGCAAAATTTTTACTGGAGCAGCTTCTGTTGAAAGCAGCTAATTGTGCAGGTTTTAGCAAGGAAGAGTTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTATAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCAACTAGCATGATCTGCTAG 1572 41.98 MLQEASTKPEGELEVSFGYKCNGNIGEIHDVSDKLEIQSGLPRVSSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSLQSSLSNLSCSPSTPTSDYDSYLLKSMSAPSGGEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNETSDGLDMDGSHLLDDSNITQGRFSPLGNNSKITSDIHNVLDNHSYAKAGMKNYPLRHGVFDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDEGSMRRNRGLKAVQLTESHTVDNELERAQLQHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILRVRNLISPPYISTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVHSYILSNPTGDPAKFLLEQLLLKAANCAGFSKEELITIPAGRRRKYHDDVTVIIIILGTNQRTTRASTSMIC* 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4771728 4775537 - Chy6G112270.1 Chy06g00699 228408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00699 523 Gene3D - 121 517 IPR036457 -
Chy06g00699 523 ProSiteProfiles PPM-type phosphatase domain profile. 139 508 IPR001932 -
Chy06g00699 523 CDD PP2Cc 152 508 IPR001932 -
Chy06g00699 523 Pfam Protein phosphatase 2C 244 459 IPR001932 -
Chy06g00699 523 SUPERFAMILY PP2C-like 153 509 IPR036457 -
Chy06g00699 523 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 3 520 - -
Chy06g00699 523 SMART PP2C_4 130 506 IPR001932 -
Chy06g00699 523 PANTHER PROTEIN PHOSPHATASE 2C 3 520 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00699 Chy-Chr6:4771728 Chy06g02129 Chy-Chr6:25615092 7.91E-15 dispersed
Chy11g01577 Chy-Chr11:22324863 Chy06g00699 Chy-Chr6:4771728 2.42E-36 dispersed
Chy06g00699 Chy-Chr6:4771728 Chy08g00754 Chy-Chr8:15251821 2.63E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00699 - - csv:101202885 993.801