Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g00735 | ATGTCTACGGCCAGTTCCAGTTCTGTAAGGAAAGCTGGTGAAGCTGTTCCCGACCAGTTTCCAGCCGGCCTTCGTGTTTTGGTTGTGGATGATGATCCAACTTGTCTTATGATCTTGGAGAAGATGCTTCGTATTTGCCGCTATGATGTAACAAATTGTAATCGAGCAGAGGACGCGCTCTCTCTACTCAGGCAGAACAAAAATGGGTTCGATATTGTTTTGAGTGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAATACATTGGATTGGAAATGGACTTGCCTGTAATTATGATGTCGGTGGATGATGGGCAAAACGTTGTCATGAAGGGAGTGACTCATGGTGCTTGTGACTATTTAATAAAACCTGTTCGAATGGAAGCGCTGAAGAACATATGGCAGCATGTTGTTCGCAAGCGGAAGAACGAATGGAAGGACTTGGAGCAAACTTGTGTTGACGATGTAGATCGGCAGCAAAAACCAAATGAAGATGCAGATTATTCATCATCTGCTAATGAAGGTAGTTGGAGGAACTCAAAGAGGAGGAAGGATGATGTAGAAGATCCGGAGGAGAGGGATGATTCATCAACCCTAAAGAAACCGAGGGTTGTTTGGTCTGTTGAGCTCCATCAACAGTTTGTGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTCCCTGGACTCACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTGTATCTGAGAAGGCTAAGTGGAATCACACAACACCAGAGTAATTTAAACAACACATTCATGAGTGCCCAAGATGCATTTGGCCCGCCACTGAACGGCCTTGATCTACAAACTCTTGCTGCTGCTGGTCAACTCCAGCCACAAAGCCTTGCTACACTTCAAGCAGCTGGATTTGGTAGGTCTACAGCAAAATCTGGGATGCCTATGCCTCTTGTCGATCAAAGGAACCACATTTTTAGCTTTGAAAATCCAAAGTTGAGATTCGGTGATGGGCAGCAGCCACATTTGAATGGTAGTAAACCAATGAATCTACTTCATGGAATTCCGACAACTATGGAGCCAAAACAACTTGCTAATCTCCAGCATTCGGCACAATCTCATGGGAACATGACAATGCAAGTTAGTGCCCAAGGAGGCCAATTGAGCTCTCAACTAATGCAGACACCTCAACCACAAGCTCGAGCGCAGATCCTTAATGAAAGTACCACAACTAGTGTAACAAGGCTTCCACAAACAATGCAGCCCTCAATTTTGCCTAATGGGACTACTAGTGCAGTTTTAGCAAGGAATGAATTTGGCAATAACAACAGAGGTGGAGGATACAATCTAGTTTCACCAGCTTCAACAATGTTAAATTTCCCTTTGAACCAAACTGCAGAATTGCCTGGTAACAGTTTTCCTCTTCAAAGTACCCCAGGAATGTCAAGCATCGTACCAAAGGGAAGATTCCCAGACGATGTTAACTCGGACATTAAAGGATCTGAAGGTTTTGGGCCAAGCTACGACATGTTTAGGGATCTTCATCCCCAGAAACCCCATGATTGGGACTTGCAGCATGTAGGCGTGACCTTCGATACATCTCAAGGTAGTCTTGACATTCCACCCTCTGCTTTTTCTCACCAAGGGTATGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTACCGCAGGCAAGGCCATGTTCTTGTTGGAAGATGGAAGTGACAATGGGAATGCACAAAGTATGGGGCAACAACTCAACCCTATTTTCGTTGATGGTTCAGTGAGAGTTAAATCTGAAAGAGCTTCTGATATTAGCAGTCAAACAGACCTTTTTTCTGAACCCTTTGGTCAGGAGGACCTAATGAGTTCACTTTTTAAGCAGAATATTGCTTTAGCTTGGCAGTCAGAGTATGGCCATTGCTTAGATTTGGTAAGAGAAGCATGTGGTTTAGATGAGGATGGACCTTTCAATTCAGCAGACAGACCATTTAGACAGATCACTCTAGCTGTAATATTCTGA | 2052 | 44.01 | MSTASSSSVRKAGEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCNRAEDALSLLRQNKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGQNVVMKGVTHGACDYLIKPVRMEALKNIWQHVVRKRKNEWKDLEQTCVDDVDRQQKPNEDADYSSSANEGSWRNSKRRKDDVEDPEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGITQHQSNLNNTFMSAQDAFGPPLNGLDLQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPMNLLHGIPTTMEPKQLANLQHSAQSHGNMTMQVSAQGGQLSSQLMQTPQPQARAQILNESTTTSVTRLPQTMQPSILPNGTTSAVLARNEFGNNNRGGGYNLVSPASTMLNFPLNQTAELPGNSFPLQSTPGMSSIVPKGRFPDDVNSDIKGSEGFGPSYDMFRDLHPQKPHDWDLQHVGVTFDTSQGSLDIPPSAFSHQGYASSQQNGQNRNTSTAGKAMFLLEDGSDNGNAQSMGQQLNPIFVDGSVRVKSERASDISSQTDLFSEPFGQEDLMSSLFKQNIALAWQSEYGHCLDLVREACGLDEDGPFNSADRPFRQITLAVIF* | 684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5017383 | 5020672 | + | Chy6G112630.1 | Chy06g00735 | 228444 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g00735 | 683 | Gene3D | - | 200 | 262 | - | - | |
Chy06g00735 | 683 | Pfam | Response regulator receiver domain | 26 | 134 | IPR001789 | GO:0000160 | |
Chy06g00735 | 683 | MobiDBLite | consensus disorder prediction | 550 | 570 | - | - | |
Chy06g00735 | 683 | Pfam | Myb-like DNA-binding domain | 205 | 255 | IPR001005 | - | |
Chy06g00735 | 683 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 203 | 256 | IPR006447 | GO:0003677 | |
Chy06g00735 | 683 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 632 | IPR045279 | GO:0009736 | |
Chy06g00735 | 683 | Gene3D | - | 24 | 157 | - | - | |
Chy06g00735 | 683 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 202 | 259 | IPR017930 | - | |
Chy06g00735 | 683 | SUPERFAMILY | CheY-like | 23 | 147 | IPR011006 | - | |
Chy06g00735 | 683 | PIRSF | RR_ARR_type-B | 5 | 652 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Chy06g00735 | 683 | MobiDBLite | consensus disorder prediction | 158 | 201 | - | - | |
Chy06g00735 | 683 | SMART | REC_2 | 24 | 136 | IPR001789 | GO:0000160 | |
Chy06g00735 | 683 | CDD | REC_typeB_ARR-like | 26 | 140 | - | - | |
Chy06g00735 | 683 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 632 | - | - | |
Chy06g00735 | 683 | MobiDBLite | consensus disorder prediction | 179 | 201 | - | - | |
Chy06g00735 | 683 | ProSiteProfiles | Response regulatory domain profile. | 25 | 140 | IPR001789 | GO:0000160 | |
Chy06g00735 | 683 | SUPERFAMILY | Homeodomain-like | 200 | 260 | IPR009057 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy06g00735 | Chy11g01546 | CCT | |
Chy06g00735 | Chy11g01546 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00735 | Chy-Chr6:5017383 | Chy07g00343 | Chy-Chr7:2803571 | 2.42E-109 | dispersed | |
Chy10g01181 | Chy-Chr10:16601426 | Chy06g00735 | Chy-Chr6:5017383 | 5.99E-20 | dispersed | |
Chy11g01950 | Chy-Chr11:25549051 | Chy06g00735 | Chy-Chr6:5017383 | 7.08E-13 | dispersed | |
Chy01g01730 | Chy-Chr1:23063959 | Chy06g00735 | Chy-Chr6:5017383 | 4.80E-10 | transposed | |
Chy06g00910 | Chy-Chr6:6670707 | Chy06g00735 | Chy-Chr6:5017383 | 1.13E-57 | transposed | |
Chy11g01951 | Chy-Chr11:25550683 | Chy06g00735 | Chy-Chr6:5017383 | 4.33E-32 | transposed | |
Chy11g02009 | Chy-Chr11:25955531 | Chy06g00735 | Chy-Chr6:5017383 | 2.55E-06 | transposed | |
Chy03g01687 | Chy-Chr3:18548026 | Chy06g00735 | Chy-Chr6:5017383 | 4.70E-96 | transposed | |
Chy12g01526 | Chy-Chr12:19020856 | Chy06g00735 | Chy-Chr6:5017383 | 2.22E-18 | transposed | |
Chy11g01546 | Chy-Chr11:22011151 | Chy06g00735 | Chy-Chr6:5017383 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18132 | PF00072 | Response_reg | 2.60E-22 | CL0304 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g00735 | - | K14491 | csv:101209013 | 1257.28 |