Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00735 ATGTCTACGGCCAGTTCCAGTTCTGTAAGGAAAGCTGGTGAAGCTGTTCCCGACCAGTTTCCAGCCGGCCTTCGTGTTTTGGTTGTGGATGATGATCCAACTTGTCTTATGATCTTGGAGAAGATGCTTCGTATTTGCCGCTATGATGTAACAAATTGTAATCGAGCAGAGGACGCGCTCTCTCTACTCAGGCAGAACAAAAATGGGTTCGATATTGTTTTGAGTGATGTCCACATGCCAGACATGGATGGATTCAAACTTCTGGAATACATTGGATTGGAAATGGACTTGCCTGTAATTATGATGTCGGTGGATGATGGGCAAAACGTTGTCATGAAGGGAGTGACTCATGGTGCTTGTGACTATTTAATAAAACCTGTTCGAATGGAAGCGCTGAAGAACATATGGCAGCATGTTGTTCGCAAGCGGAAGAACGAATGGAAGGACTTGGAGCAAACTTGTGTTGACGATGTAGATCGGCAGCAAAAACCAAATGAAGATGCAGATTATTCATCATCTGCTAATGAAGGTAGTTGGAGGAACTCAAAGAGGAGGAAGGATGATGTAGAAGATCCGGAGGAGAGGGATGATTCATCAACCCTAAAGAAACCGAGGGTTGTTTGGTCTGTTGAGCTCCATCAACAGTTTGTGGCTGCTGTTAATCAACTAGGAATTGATAAGGCTGTTCCCAAGAAGATTCTGGAGTTGATGAATGTCCCTGGACTCACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATATCGCTTGTATCTGAGAAGGCTAAGTGGAATCACACAACACCAGAGTAATTTAAACAACACATTCATGAGTGCCCAAGATGCATTTGGCCCGCCACTGAACGGCCTTGATCTACAAACTCTTGCTGCTGCTGGTCAACTCCAGCCACAAAGCCTTGCTACACTTCAAGCAGCTGGATTTGGTAGGTCTACAGCAAAATCTGGGATGCCTATGCCTCTTGTCGATCAAAGGAACCACATTTTTAGCTTTGAAAATCCAAAGTTGAGATTCGGTGATGGGCAGCAGCCACATTTGAATGGTAGTAAACCAATGAATCTACTTCATGGAATTCCGACAACTATGGAGCCAAAACAACTTGCTAATCTCCAGCATTCGGCACAATCTCATGGGAACATGACAATGCAAGTTAGTGCCCAAGGAGGCCAATTGAGCTCTCAACTAATGCAGACACCTCAACCACAAGCTCGAGCGCAGATCCTTAATGAAAGTACCACAACTAGTGTAACAAGGCTTCCACAAACAATGCAGCCCTCAATTTTGCCTAATGGGACTACTAGTGCAGTTTTAGCAAGGAATGAATTTGGCAATAACAACAGAGGTGGAGGATACAATCTAGTTTCACCAGCTTCAACAATGTTAAATTTCCCTTTGAACCAAACTGCAGAATTGCCTGGTAACAGTTTTCCTCTTCAAAGTACCCCAGGAATGTCAAGCATCGTACCAAAGGGAAGATTCCCAGACGATGTTAACTCGGACATTAAAGGATCTGAAGGTTTTGGGCCAAGCTACGACATGTTTAGGGATCTTCATCCCCAGAAACCCCATGATTGGGACTTGCAGCATGTAGGCGTGACCTTCGATACATCTCAAGGTAGTCTTGACATTCCACCCTCTGCTTTTTCTCACCAAGGGTATGCCTCTAGCCAACAAAATGGACAAAACAGGAACACATCTACCGCAGGCAAGGCCATGTTCTTGTTGGAAGATGGAAGTGACAATGGGAATGCACAAAGTATGGGGCAACAACTCAACCCTATTTTCGTTGATGGTTCAGTGAGAGTTAAATCTGAAAGAGCTTCTGATATTAGCAGTCAAACAGACCTTTTTTCTGAACCCTTTGGTCAGGAGGACCTAATGAGTTCACTTTTTAAGCAGAATATTGCTTTAGCTTGGCAGTCAGAGTATGGCCATTGCTTAGATTTGGTAAGAGAAGCATGTGGTTTAGATGAGGATGGACCTTTCAATTCAGCAGACAGACCATTTAGACAGATCACTCTAGCTGTAATATTCTGA 2052 44.01 MSTASSSSVRKAGEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCNRAEDALSLLRQNKNGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGQNVVMKGVTHGACDYLIKPVRMEALKNIWQHVVRKRKNEWKDLEQTCVDDVDRQQKPNEDADYSSSANEGSWRNSKRRKDDVEDPEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGITQHQSNLNNTFMSAQDAFGPPLNGLDLQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQRNHIFSFENPKLRFGDGQQPHLNGSKPMNLLHGIPTTMEPKQLANLQHSAQSHGNMTMQVSAQGGQLSSQLMQTPQPQARAQILNESTTTSVTRLPQTMQPSILPNGTTSAVLARNEFGNNNRGGGYNLVSPASTMLNFPLNQTAELPGNSFPLQSTPGMSSIVPKGRFPDDVNSDIKGSEGFGPSYDMFRDLHPQKPHDWDLQHVGVTFDTSQGSLDIPPSAFSHQGYASSQQNGQNRNTSTAGKAMFLLEDGSDNGNAQSMGQQLNPIFVDGSVRVKSERASDISSQTDLFSEPFGQEDLMSSLFKQNIALAWQSEYGHCLDLVREACGLDEDGPFNSADRPFRQITLAVIF* 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5017383 5020672 + Chy6G112630.1 Chy06g00735 228444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00735 683 Gene3D - 200 262 - -
Chy06g00735 683 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Chy06g00735 683 MobiDBLite consensus disorder prediction 550 570 - -
Chy06g00735 683 Pfam Myb-like DNA-binding domain 205 255 IPR001005 -
Chy06g00735 683 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677
Chy06g00735 683 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 632 IPR045279 GO:0009736
Chy06g00735 683 Gene3D - 24 157 - -
Chy06g00735 683 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 259 IPR017930 -
Chy06g00735 683 SUPERFAMILY CheY-like 23 147 IPR011006 -
Chy06g00735 683 PIRSF RR_ARR_type-B 5 652 IPR017053 GO:0003677|GO:0003700|GO:0009736
Chy06g00735 683 MobiDBLite consensus disorder prediction 158 201 - -
Chy06g00735 683 SMART REC_2 24 136 IPR001789 GO:0000160
Chy06g00735 683 CDD REC_typeB_ARR-like 26 140 - -
Chy06g00735 683 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 632 - -
Chy06g00735 683 MobiDBLite consensus disorder prediction 179 201 - -
Chy06g00735 683 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Chy06g00735 683 SUPERFAMILY Homeodomain-like 200 260 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00735 Chy11g01546 CCT
Chy06g00735 Chy11g01546 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00735 Chy-Chr6:5017383 Chy07g00343 Chy-Chr7:2803571 2.42E-109 dispersed
Chy10g01181 Chy-Chr10:16601426 Chy06g00735 Chy-Chr6:5017383 5.99E-20 dispersed
Chy11g01950 Chy-Chr11:25549051 Chy06g00735 Chy-Chr6:5017383 7.08E-13 dispersed
Chy01g01730 Chy-Chr1:23063959 Chy06g00735 Chy-Chr6:5017383 4.80E-10 transposed
Chy06g00910 Chy-Chr6:6670707 Chy06g00735 Chy-Chr6:5017383 1.13E-57 transposed
Chy11g01951 Chy-Chr11:25550683 Chy06g00735 Chy-Chr6:5017383 4.33E-32 transposed
Chy11g02009 Chy-Chr11:25955531 Chy06g00735 Chy-Chr6:5017383 2.55E-06 transposed
Chy03g01687 Chy-Chr3:18548026 Chy06g00735 Chy-Chr6:5017383 4.70E-96 transposed
Chy12g01526 Chy-Chr12:19020856 Chy06g00735 Chy-Chr6:5017383 2.22E-18 transposed
Chy11g01546 Chy-Chr11:22011151 Chy06g00735 Chy-Chr6:5017383 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18132 PF00072 Response_reg 2.60E-22 CL0304 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00735 - K14491 csv:101209013 1257.28