Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy06g00764 | ATGGCGTCGTCTCTGATTCTGAATCCTGTGACGAGTTCTGAACGATCGCGTGATTCTTCAAGAAAGAAGAAGAAGAAGAAAGCGACAAGAGAAGATGATCGTCAAGATCAGGATCAAATCAAATGGAAATCACAAGCTCAACATCAAGTTTACTCTTCGAAGCTGTTGCGCGCTTTGAGTCAGGTCAGGATCAGTTCTCCTGAGCCAACACCAAACGAAACGCCTCGGCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTTTAGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGAAAACACAATAAACAGAAAGCGCGTGTGATCGGAAACAGCCGTACGAAGAAGCCGAGTGTTAGCGTTTTACGGTTGAGAGGAAAAGGACTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTAGATGAAGTAACCGATTATATTCCAGCTCTGGAGATGCAGATCCGAGTCATGAGTGCCATAGTCAACTTGGTTTCAAGCTCCTCTTCATCTTCTACTGATGACGTTCAAGAAAAAGAGATGAGTCTCCGGTGA | 639 | 48.51 | MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALSQVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSSTDDVQEKEMSLR* | 213 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5263982 | 5264855 | + | Chy6G112920.1 | Chy06g00764 | 228473 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy06g00764 | 212 | MobiDBLite | consensus disorder prediction | 61 | 84 | - | - | |
| Chy06g00764 | 212 | MobiDBLite | consensus disorder prediction | 25 | 41 | - | - | |
| Chy06g00764 | 212 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 202 | - | - | |
| Chy06g00764 | 212 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Chy06g00764 | 212 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 202 | IPR044660 | GO:0006355 | |
| Chy06g00764 | 212 | CDD | bHLH_AtIBH1_like | 135 | 190 | IPR044549 | GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g00764 | Chy-Chr6:5263982 | Chy08g01110 | Chy-Chr8:18230975 | 1.76E-38 | dispersed | |
| Chy03g00298 | Chy-Chr3:3222562 | Chy06g00764 | Chy-Chr6:5263982 | 5.05E-09 | transposed | |
| Chy11g01580 | Chy-Chr11:22358682 | Chy06g00764 | Chy-Chr6:5263982 | 3.59E-74 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy06g00764 | - | - | csv:105434845 | 357.836 |