Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00766 ATGGAAAAGAAATTTGAAGAAGAATCAATGATGGGGTTTGATGATTCCGCTGGGCTTTACTCTCCGGCGGTGTTTTCCGATGACTTTCCGTCCTCTAATTTTGATTCTTTTTCCAGTATTTTCAACATGCCATGTGATGCCCATAAAGCTTCTAATTTTGATTTTTATTATTACAATAATAATAATAGTAACAGTAATAACAATCCTTCTTCTTTCTTCGATTTGCTTTCTACGGCGGCTCCCCAACTTTCTTCACCGGCCTCCACCGTGCCGGAATCTTCCGAGGTTGTTAATGCTCCAACCACTCCTAATTCTTCCTCTGTTTCTTCTTCATCCAATGAAGCTGCCGCCATTGAAGAAGTCAACAACAGTACTACGACTCATGACAAGCCTTCTGCTTCTAAAGTGTTGAAACCAATAAAGAAGAACCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATCATCTCGACGACGGTTACCGGTGGCGAAAGTACGGTCAAAAAGCTGTGAAGAATAGCCCTTACCCCAGAAGCTATTATCGTTGTACAACGGCAGGGTGTGGTGTGAAGAAGAGAGTAGAGCGGTCGTCCGGCGACCATACTATAGTCGTTACAACGTACGAAGGCCAACACACTCACCAAAGTCCAATAATGCCTCGAGGGAGTCTCAGAGTTTTACCAGAATCCACCAACAACAGCCTCACCGTCGTTCACGACACCACCGCCACCGGACTTTTATTCCAACACAACACTTCCCAACCCTTCATGTTTAGCGCTCCACCCCCGCCATTTCTAACAATCAACTCGTCGTCGGTGGCAGCCAGCCATCATCCTCCTCCTATTTCATTTCAGTCACCGTCGTCGCAAGCTTCCGTCCGAGACCATGGGCTTTTACAGGACTTAGTGCCATTGCAAATGAGAAAGGAACCAAAAGATGAGCAAAATGGATGA 972 45.16 MEKKFEEESMMGFDDSAGLYSPAVFSDDFPSSNFDSFSSIFNMPCDAHKASNFDFYYYNNNNSNSNNNPSSFFDLLSTAAPQLSSPASTVPESSEVVNAPTTPNSSSVSSSSNEAAAIEEVNNSTTTHDKPSASKVLKPIKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSGDHTIVVTTYEGQHTHQSPIMPRGSLRVLPESTNNSLTVVHDTTATGLLFQHNTSQPFMFSAPPPPFLTINSSSVAASHHPPPISFQSPSSQASVRDHGLLQDLVPLQMRKEPKDEQNG* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5293301 5294752 + Chy6G112940.1 Chy06g00766 228475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00766 323 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 41 307 - -
Chy06g00766 323 MobiDBLite consensus disorder prediction 83 149 - -
Chy06g00766 323 MobiDBLite consensus disorder prediction 275 301 - -
Chy06g00766 323 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy06g00766 323 MobiDBLite consensus disorder prediction 275 323 - -
Chy06g00766 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 307 IPR044810 GO:0003700
Chy06g00766 323 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy06g00766 323 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy06g00766 323 MobiDBLite consensus disorder prediction 83 132 - -
Chy06g00766 323 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy06g00766 323 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01770 Chy-Chr1:23354401 Chy06g00766 Chy-Chr6:5293301 3.77E-48 dispersed
Chy04g01167 Chy-Chr4:17896982 Chy06g00766 Chy-Chr6:5293301 2.44E-47 dispersed
Chy06g00766 Chy-Chr6:5293301 Chy11g01009 Chy-Chr11:14264192 2.08E-38 dispersed
Chy07g01479 Chy-Chr7:19127167 Chy06g00766 Chy-Chr6:5293301 2.88E-33 dispersed
Chy03g00701 Chy-Chr3:9543590 Chy06g00766 Chy-Chr6:5293301 2.00E-45 transposed
Chy06g00013 Chy-Chr6:100402 Chy06g00766 Chy-Chr6:5293301 2.35E-34 transposed
Chy06g01543 Chy-Chr6:17107919 Chy06g00766 Chy-Chr6:5293301 1.66E-36 transposed
Chy11g01581 Chy-Chr11:22383847 Chy06g00766 Chy-Chr6:5293301 4.01E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18136 PF03106 WRKY 1.70E-25 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00766 - - csv:101218177 547.354