Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00794 ATGAATCGGAGTTGGTTTCAGATAAAGCGTGAAATAAGTACTCTCAAGCTTCTTAGGCATCCGAATGTTGTTAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCTTCTGGTGGAGAATTGTTTGATAGAATTGAATCGAAAGGTAAGATGGATGAAGCTGAAGGTCGGAGGATTTTCCAGCAGCTTATTGATGGTCTTAGCTACTGCCATGACAAAGGAGTTTACCACAGGGATCTCAAGTTGGAAAACGTGCTTGTTGATGCTAAGGGAAATATTAAGATTTCTGATTTTGGTCTCAGTGCTTTACCAAAGAATTGCCGGGAAGATGGTTTGCTGCACACAACCTGTGGAAGTCCTAACTATGTTGCACCAGAGGTTCTTGCTAATAGAGGATATAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTTATTCTTACGGCTTTTCTACCTTTCGACGAGACCAATTTGGCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATCAGGAGAACTCTCGACCCCAATCCCAATACTCGGATAACCATAGCAGGAATCAAAGAGAATGAGTGGTTTAAGACTGACTATAATCCTGCTTCTCCTTGTTATGATGACGATGAGGAGGAGGGTTCACTTACTGATCAGGATGATGCCATCTCAACGCTTGATGAGCCATCTGACGCTGAAAACAGCCCGGAATCTCCTTCTATTATCAATGCTTTTGAGTTAATTGGAATGTCTTCAAGTTTGGATTTATCCGGATTCTTTGAGCAAGAGGATGTCTCCGAGAGGAAGATCAGATTCACCTCAAATCGTTCTGCCAAAGACTTGCTTGAGAGAATCGAGGTTATCGCAACGGATATGGGATTTCGAGTTCAAAAGAGAAGTGGAAAGTTGAAATTGATTCAAGAGATAAGAAGTCAAAAAAGCCTAAGTAATCTATCATTTGTAGCAGAGGTCTTTGAGATACGCCCACTGCTTCATGTAGTTGAACTGAAAAAATCGTTTGGAGACTCATCAGCTTACAGACAGTTGTGTGAAAGACTGTCAAGTGATTTGGGCACAAACCCAGAGCTCGAACGGCAAAATTCAAGCTCGTTTGCATTAAACAGTACATGTTAG 1200 41.33 MNRSWFQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIESKGKMDEAEGRRIFQQLIDGLSYCHDKGVYHRDLKLENVLVDAKGNIKISDFGLSALPKNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTAFLPFDETNLALLYKKTLRGDFQIPKWLSAGARNLIRRTLDPNPNTRITIAGIKENEWFKTDYNPASPCYDDDEEEGSLTDQDDAISTLDEPSDAENSPESPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNRSAKDLLERIEVIATDMGFRVQKRSGKLKLIQEIRSQKSLSNLSFVAEVFEIRPLLHVVELKKSFGDSSAYRQLCERLSSDLGTNPELERQNSSSFALNSTC* 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5566387 5568861 + Chy6G113220.1 Chy06g00794 228503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00794 399 Pfam Protein kinase domain 7 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00794 399 ProSiteProfiles NAF domain profile. 259 283 IPR018451 GO:0007165
Chy06g00794 399 SMART serkin_6 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00794 399 PANTHER CBL-INTERACTING PROTEIN KINASE 21 7 385 - -
Chy06g00794 399 MobiDBLite consensus disorder prediction 241 260 - -
Chy06g00794 399 SUPERFAMILY Protein kinase-like (PK-like) 5 228 IPR011009 -
Chy06g00794 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Chy06g00794 399 Gene3D Transferase(Phosphotransferase) domain 1 1 265 - -
Chy06g00794 399 Pfam NAF domain 261 320 IPR004041 GO:0007165
Chy06g00794 399 Gene3D Kinase associated domain 1, KA1 266 381 - -
Chy06g00794 399 PANTHER - 7 385 - -
Chy06g00794 399 MobiDBLite consensus disorder prediction 223 260 - -
Chy06g00794 399 CDD CIPK_C 265 379 - -
Chy06g00794 399 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00794 Chy-Chr6:5566387 Chy11g01612 Chy-Chr11:22678895 5.32E-180 dispersed
Chy11g01611 Chy-Chr11:22657667 Chy06g00794 Chy-Chr6:5566387 9.28E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71321 PF00069 Pkinase 5.20E-60 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00794 K07198 - csv:101205987 780.4