Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00818 ATGGAGGACGATTTCGAGTTCCCATCTGCAAACAACGTGGATGAGGAAATGGGGTTGCCTGAGGACGAAGCCGAGAGCCCAGTTCTGAATGTTGGCCAAGAGAAGGAGATTGGGAAGAATGGGTTGAAGAAGAAACTTGTTAAAGAAGGTGAAGGATGGGAAACTCCCGACACTGGTGATGAGGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGCACTCAGTTTGATTCGAGCCGTGACCGAGGAACGCCTTTCAAGTTCAAGCTCGGGGAAGGCCAAGTGATTAAAGGGTGGGATGAAGGTATCAGAACAATGAAAAAGGGTGAAAATGCAGTTTTCACGATACCCCCGGAATTGGCCTATGGAGAGTCCGGCTCTCCTCCAACAATACCACCGAACGCTACTCTTCAATTTGACGTTGAGCTACTTTCGTGGCACAGTGTCAAAGACATTTGTCAAGATGGAGGAATCTTGAAAAAAATCCTTGTTAAAGGAGATGGTTGGGAAAAACCGAAGGATCTAGACGAAGTTCTGGTTCGTTATGAGGCTCGTCTTGAAAATGGTACACTGATCTCAAAGTCTGATGGGGTCGAATTCACTGTTGAAAAGGGGTACTTCTGTCCTGCCTTGGCAACTGCTGTGAAGACGATGAAAAAAGGGGAGAAAGCTTTGTTGACTGTTAGACCACAATATGGATTTGGGGAGTCTGGTAGGCCTGTAGCTGGAGAAGAAGGTGCTGTGCCTCCAAATGGTACACTTCAAATTACCCTTCAATTGGATTCATGGAAAACTGTTTCAGAGATCACCAAGGATAAGAAGGTCTTGAAGAAGACCCAGAAGGAGGGAGAAGGATATGAACAACCAAATGAGGGAGCAGTGGTGCAAGTGAAACTTACCGGTAAACTGGCTGATGGGACGATTTTTACTAAGAAGGGTGATGATGAGAGAACGTTTGAGTTCAAAATTGACGAAGAACAAGTCATTGAAGGACTCGATTTGGCTGTGAGAAAGATGAAGAAGGGAGAAATTGCCTTGGTGACGATCCATCCACAATATGCTTTTGGATCTTCTGATTCATCACAAGATCTGGCTGTGGTTCCGGCAAACTCAACTGTATATTACGAAGTTGAGCTGGTTTCATTCGTCAAAGAAAAAGAATCTTGGGACCTGAACAAAGCAGAAGAGAAAATAGAAGCAGCAGGTAAAAAGAAGGAAGAAGGAAACGTTCTATTCAAAGCTGGAAAATATGAGAGAGCATCAAGACGATATGAAAAGGCTGTCCGCTACATTGAATATGATACTTCTTTCAGTGACGAGGAGAAGCAACAGAGCAAGGCACTAAAGATTTCATGCAATCTCAACAATGCTGCTTGCAAACTGAAAGTCAAAGACTACAAACAAGCAGAGAAGCTTTGTACAAAGGTGTTGGAACTTGACAGTAGGAACGTGAAAGCTCTATATAGAAGGGCTCAAGCATGTATTCAACTTGTTGATCTTGATCTTGCTGAGCGGGATATCAAGAAAGCCCTCGAGATTGACCCAGATAACAGGGATGTGAAGATTGAATACAGGCAATTGAAAGACAAGGTGAGGGAATACAATAAGAGAGATGCACAGTTTTACGGCAACATTTTTGCAAAAATGAACAAGTTGGAGCATGCTAAGTCTGCTGATAACCAACCACAGCCCGTAAGACCAAGAGTGCTTGGCAGGCCAATTTTGCTTGCTTTGGAAGATGTTGATGGAAATCCCTTTTTCCTGGAGAAAGCCCTTAGGTTTATAGAGGGCCATGGAGTCAAAGTTGAAGGAATTTTGCGACAAGCTGCAGACGTTGATGACGTTGAACGTCGTGTGCGGGATTATGAACAAGGAAAAAAAGAGTTTTCTTCGGAAGAAGATGCACACGTAGTGGCTGACTGCATGAAGTTACCATCATCTCCAGTTCCGGCATCTTGCTGTAACGCATTACTAGAAGCATGCACTTTTCATAAAGCTGAGAATCGAATGAGCTCTTCAGCGGTGGCAGCTTGCATAGCTCCCTTACTCCTTCGTCCTCTTTTAGCGGGTGATTGTGAAATTGAAACCGATTTTGACGTGGGGGGTGATGGTTCTATTCAACTTCTTCGGGCAGTTGCTGCAGCAAACCATGCTCAAGCCATAGTTATTACTTTACTGGAGGAACATGCTCAGAAGGCTATAAAGTTTACTTTGACTAGAATGAGTTTAGTGCGCATATCTCTTGGCCAAGTTAATACTTGGAAGATTAGTTACCTTGAATGTTCCATGTCCCCTATTATGTACTCGGATTTGGAAGAGAGTGGAAGTGAGAGGGAAGAGGCAACTGATGATGAAATGTCTTATGACGATGAAGAACAAGATGTTGTCACTGGTTCTGATGCAGAAACAGGTGATGAACTTGAATCAAGTGGAACCTGTAGCGGGAGTGTTGACACTGAGGATCATGAATATGATGATAAGGCACGAGTCGTTGTTTATGGGTATGAGCTGAAAATTGGATGGGGAAAGTCTGTTGCTCTTCCTTCCCAAGCATTACCTGCGCCTCCTCCAAGTCATATGGCTATTAGAAGTAAGGAGGGTGGCACTGTTATCTTATCTGGCTCATCAGACCCCAGACCTCCTGAGCCAATGGTTCCGACACCTAACATTCCTGATATTACTGTTGAACCACTTGAGGATGATCATCTTCACCATGTCATTGACACTATGGCTCTTTATGTTCTGGATGGAGGTTGTGTTTTTTGA 2766 44.03 MEDDFEFPSANNVDEEMGLPEDEAESPVLNVGQEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWEKPKDLDEVLVRYEARLENGTLISKSDGVEFTVEKGYFCPALATAVKTMKKGEKALLTVRPQYGFGESGRPVAGEEGAVPPNGTLQITLQLDSWKTVSEITKDKKVLKKTQKEGEGYEQPNEGAVVQVKLTGKLADGTIFTKKGDDERTFEFKIDEEQVIEGLDLAVRKMKKGEIALVTIHPQYAFGSSDSSQDLAVVPANSTVYYEVELVSFVKEKESWDLNKAEEKIEAAGKKKEEGNVLFKAGKYERASRRYEKAVRYIEYDTSFSDEEKQQSKALKISCNLNNAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQACIQLVDLDLAERDIKKALEIDPDNRDVKIEYRQLKDKVREYNKRDAQFYGNIFAKMNKLEHAKSADNQPQPVRPRVLGRPILLALEDVDGNPFFLEKALRFIEGHGVKVEGILRQAADVDDVERRVRDYEQGKKEFSSEEDAHVVADCMKLPSSPVPASCCNALLEACTFHKAENRMSSSAVAACIAPLLLRPLLAGDCEIETDFDVGGDGSIQLLRAVAAANHAQAIVITLLEEHAQKAIKFTLTRMSLVRISLGQVNTWKISYLECSMSPIMYSDLEESGSEREEATDDEMSYDDEEQDVVTGSDAETGDELESSGTCSGSVDTEDHEYDDKARVVVYGYELKIGWGKSVALPSQALPAPPPSHMAIRSKEGGTVILSGSSDPRPPEPMVPTPNIPDITVEPLEDDHLHHVIDTMALYVLDGGCVF* 922
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5733954 5752545 + Chy6G113460.1 Chy06g00818 228527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00818 921 Coils Coil 612 632 - -
Chy06g00818 921 MobiDBLite consensus disorder prediction 771 821 - -
Chy06g00818 921 SUPERFAMILY FKBP-like 37 153 - -
Chy06g00818 921 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755
Chy06g00818 921 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755
Chy06g00818 921 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Chy06g00818 921 CDD RhoGAP 585 679 - -
Chy06g00818 921 Gene3D Rho GTPase activation protein 553 663 IPR008936 GO:0007165
Chy06g00818 921 PANTHER PEPTIDYLPROLYL ISOMERASE 383 572 - -
Chy06g00818 921 PANTHER PEPTIDYLPROLYL ISOMERASE 275 383 - -
Chy06g00818 921 PANTHER PEPTIDYLPROLYL ISOMERASE 18 271 - -
Chy06g00818 921 SMART tpr_5 484 517 IPR019734 GO:0005515
Chy06g00818 921 SMART tpr_5 401 434 IPR019734 GO:0005515
Chy06g00818 921 SMART tpr_5 450 483 IPR019734 GO:0005515
Chy06g00818 921 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 383 572 - -
Chy06g00818 921 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 275 383 - -
Chy06g00818 921 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 18 271 - -
Chy06g00818 921 MobiDBLite consensus disorder prediction 803 817 - -
Chy06g00818 921 Gene3D Tetratricopeptide repeat domain 386 544 IPR011990 GO:0005515
Chy06g00818 921 MobiDBLite consensus disorder prediction 1 22 - -
Chy06g00818 921 SUPERFAMILY FKBP-like 151 267 - -
Chy06g00818 921 Pfam Tetratricopeptide repeat 463 520 - -
Chy06g00818 921 SUPERFAMILY FKBP-like 267 398 - -
Chy06g00818 921 SUPERFAMILY GTPase activation domain, GAP 585 728 IPR008936 GO:0007165
Chy06g00818 921 MobiDBLite consensus disorder prediction 776 801 - -
Chy06g00818 921 MobiDBLite consensus disorder prediction 1 35 - -
Chy06g00818 921 Gene3D - 265 385 IPR046357 GO:0003755
Chy06g00818 921 SMART RhoGAP_3 582 730 IPR000198 GO:0007165
Chy06g00818 921 Coils Coil 517 537 - -
Chy06g00818 921 SUPERFAMILY TPR-like 397 549 IPR011990 GO:0005515
Chy06g00818 921 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Chy06g00818 921 Pfam RhoGAP domain 585 644 IPR000198 GO:0007165
Chy06g00818 921 Coils Coil 384 404 - -
Chy06g00818 921 Gene3D - 32 149 IPR046357 GO:0003755
Chy06g00818 921 Gene3D - 150 264 IPR046357 GO:0003755
Chy06g00818 921 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 144 IPR001179 GO:0003755
Chy06g00818 921 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 380 IPR001179 GO:0003755
Chy06g00818 921 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 170 259 IPR001179 GO:0003755
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00210 Chy-Chr1:1434294 Chy06g00818 Chy-Chr6:5733954 1.36E-07 dispersed
Chy01g01423 Chy-Chr1:19733043 Chy06g00818 Chy-Chr6:5733954 0 dispersed
Chy01g01424 Chy-Chr1:19740005 Chy06g00818 Chy-Chr6:5733954 7.48E-07 dispersed
Chy03g00133 Chy-Chr3:1249739 Chy06g00818 Chy-Chr6:5733954 1.60E-09 dispersed
Chy03g01296 Chy-Chr3:15963358 Chy06g00818 Chy-Chr6:5733954 2.73E-119 dispersed
Chy04g01248 Chy-Chr4:18993340 Chy06g00818 Chy-Chr6:5733954 2.82E-08 dispersed
Chy05g00045 Chy-Chr5:303027 Chy06g00818 Chy-Chr6:5733954 1.54E-12 dispersed
Chy06g00818 Chy-Chr6:5733954 Chy08g00687 Chy-Chr8:14709427 1.17E-65 dispersed
Chy06g00870 Chy-Chr6:6281937 Chy06g00818 Chy-Chr6:5733954 5.91E-06 dispersed
Chy07g01512 Chy-Chr7:19388433 Chy06g00818 Chy-Chr6:5733954 5.54E-15 dispersed
Chy11g01983 Chy-Chr11:25752554 Chy06g00818 Chy-Chr6:5733954 2.43E-15 dispersed
Chy12g00485 Chy-Chr12:6323408 Chy06g00818 Chy-Chr6:5733954 1.08E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00818 K09571 - csv:101210041 1062.37