Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00824 ATGGAGAAGGACAAACCCCAAAGCTTTTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCAATGCCTTCCGGTGGTCTTTCAGATTCAGGTCAATTTGGTCATGGAATGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTAGAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTGATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACCGAGGAAGATCTGTTGTCCATGTACCTTGACATGGACAAATTCATTTCCTCAACTGCCACCTCCACGATACAAGTTGGCGAGTCATCTTCGGCTGTTGGAGAAGCAAGATCAACTCCTACTTCAACAATTGAAGCAGCTTCCTCTAAAGATGATGCTGCCGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCTATGGATGGCTTGACAACCATAAAGCCTGAGATGCTCGTCTCTGGGTCTGATGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAACTCGCTGAGCTTGCGTTAATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCAGCCGCTAGGTCAAAGGAAAGAAAGATGCGGTACATCGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAATGGTCTTTCTGCTGAGAACAATGAACTAAAGCTGCGGTTACAGACAATGGAGCAGCAGATGAGATTCAGTAATATTCTTTTGGGGCCCATCTTTATTAGTATCTCTATGTTGACAGCTCTAAACGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGCCCAACCCTTTTACCCAAGCAATCAAGCAATGCACACGTTGTTAACTGCACAGCAGTTTCAACAACTTCAAATCCACTCACAGCAGCAACAGCAGCAACAACAACATTTCCAATACAATCAGCTTCATCAGCTTCATCAACAGTCAACTGGAGACAACAAATCCAAAGGATCGGCATCTTCTCCAAATCCAAAAGACAACAACACATCAGATACGTCCTCTACCACTTGTTGA 1302 44.55 MEKDKPQSFSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGGLSDSGQFGHGMPTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFISSTATSTIQVGESSSAVGEARSTPTSTIEAASSKDDAAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSDEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQMRFSNILLGPIFISISMLTALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAAQPFYPSNQAMHTLLTAQQFQQLQIHSQQQQQQQQHFQYNQLHQLHQQSTGDNKSKGSASSPNPKDNNTSDTSSTTC* 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5814339 5816673 + Chy6G113520.1 Chy06g00824 228533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00824 433 Gene3D - 231 283 - -
Chy06g00824 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 427 - -
Chy06g00824 433 Coils Coil 247 302 - -
Chy06g00824 433 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 427 - -
Chy06g00824 433 MobiDBLite consensus disorder prediction 1 84 - -
Chy06g00824 433 SUPERFAMILY Leucine zipper domain 231 282 IPR046347 GO:0003700|GO:0006355
Chy06g00824 433 CDD bZIP_plant_RF2 232 281 IPR044759 GO:0003700|GO:0006355
Chy06g00824 433 MobiDBLite consensus disorder prediction 11 45 - -
Chy06g00824 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 292 IPR004827 GO:0003700|GO:0006355
Chy06g00824 433 Pfam bZIP transcription factor 231 285 IPR004827 GO:0003700|GO:0006355
Chy06g00824 433 Coils Coil 317 337 - -
Chy06g00824 433 SMART brlzneu 227 291 IPR004827 GO:0003700|GO:0006355
Chy06g00824 433 MobiDBLite consensus disorder prediction 401 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00824 Chy-Chr6:5814339 Chy10g00314 Chy-Chr10:7869775 3.51E-59 dispersed
Chy06g00824 Chy-Chr6:5814339 Chy06g00833 Chy-Chr6:5912175 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18140 PF00170 bZIP_1 2.30E-08 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00824 - - csv:101210291 688.337