Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00833 ATGGACAAGGAAAAGCCCCAAAGCCATGGGGGAGGGGGAGGATTTCTGCACCAATCAAGTCGTTTCTCGGGTTTTTCATCTGCTGAAAGTAGTTTCAATGGGAAATCTGAGGCAACTTCGTCTTCCATGTCATTCCCTCCATTGGCTCCGAGTACTAATTCTGATTGGGGTCAATCTGGCCGTGGATTATCTACCGATTCCACTCGGTTCAGCAATGATATTAGTCGGATGCCTGAAAATCCACGGAGAAATGTTGGTCATAGGCGTGCCCACTCAGAGATCCTGACCCTCCCAGATGATATTTGTTTCGATAGTGACCTTGGCATCATTGGCGGGGCTGATGGGCCTTCTCTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCCTCGACTGCTACTTCTGCAAATCAAGTGGGTGACTCATCTTCTCCCCTTGTAGAAGCAGCAGCAACTTCTACAGATGATATTGCTGTTGGATTGAAGGAGAGACCCAGAGTTAGACATCAGCATAGCCAGTCCATGGATGGCTTGACAAACATTAAGCCTGAGATGCTTGTCTCTGGGTCTGACGAAGCGTCTGCAGCTGATGCCAAGAAAGCCATGTCAGCTGCAAAGCTTGCTGAGCTTGCGTTGATTGACCCCAAACGTGCCAAAAGGATATGGGCAAACAGACAATCGGCTGCACGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAAACTTTGCAAACAGAGGCAACTTCTTTGTCTACTCAGTTGACCCTCTTACAGAGAGATGCAAATGGTATCACTGCCGAGAACAGTGAACTAAAGCTGCGATTGCAGACAATGGAACAGCAGGTTCACCTGCAAGACGCTTTAAATGAAGCACTGAAAGAAGAAATTCAGCATCTGAAAGTCTTGACTGGCCAAGCAATGCCAAACGGTAGATCAATTACAAACTTTGCTTCCTTTGGAGCCGGCCAACAGTTCTATGCTCCAAACAATCAAGCAGTGCATACTTTGTTAACTGCCCAACAGTTTCAGCAACTTCAAATACAATCCCAACAGCAGCAGCAACAGCAACAGCATTTTCAATACCAACAACTGCATCAGCTTCAGCAACAACAGGCAGGAGACATAAGAATGAAAGGGTCCGTATCTCCTCAAAGCTCAAAAGACTCTGTATCTGACACGAAGCCGCCTACCACTTGCTGA 1242 46.38 MDKEKPQSHGGGGGFLHQSSRFSGFSSAESSFNGKSEATSSSMSFPPLAPSTNSDWGQSGRGLSTDSTRFSNDISRMPENPRRNVGHRRAHSEILTLPDDICFDSDLGIIGGADGPSLSDDTEEDLLSMYLDMDKFNSSTATSANQVGDSSSPLVEAAATSTDDIAVGLKERPRVRHQHSQSMDGLTNIKPEMLVSGSDEASAADAKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSTQLTLLQRDANGITAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAMPNGRSITNFASFGAGQQFYAPNNQAVHTLLTAQQFQQLQIQSQQQQQQQQHFQYQQLHQLQQQQAGDIRMKGSVSPQSSKDSVSDTKPPTTC* 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5912175 5916434 - Chy6G113610.1 Chy06g00833 228542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00833 413 MobiDBLite consensus disorder prediction 1 88 - -
Chy06g00833 413 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 285 IPR004827 GO:0003700|GO:0006355
Chy06g00833 413 Gene3D - 223 275 - -
Chy06g00833 413 MobiDBLite consensus disorder prediction 386 413 - -
Chy06g00833 413 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 406 - -
Chy06g00833 413 CDD bZIP_plant_RF2 225 274 IPR044759 GO:0003700|GO:0006355
Chy06g00833 413 SUPERFAMILY Leucine zipper domain 224 274 IPR046347 GO:0003700|GO:0006355
Chy06g00833 413 Pfam bZIP transcription factor 224 272 IPR004827 GO:0003700|GO:0006355
Chy06g00833 413 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Chy06g00833 413 MobiDBLite consensus disorder prediction 19 78 - -
Chy06g00833 413 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 406 - -
Chy06g00833 413 Coils Coil 240 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00833 Chy-Chr6:5912175 Chy10g00314 Chy-Chr10:7869775 1.45E-67 dispersed
Chy06g00824 Chy-Chr6:5814339 Chy06g00833 Chy-Chr6:5912175 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18142 PF00170 bZIP_1 1.00E-08 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00833 - - csv:101212010 684.871