Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00888 ATGGCTGATTCTCCTCTCAAATGCCTGTGTTTCCTTCTGTTTTTAGACTCTTTCCTTCTTTCAAGTGCTCTGTTTCTCAAAACTTATGTTGTTCAAATGGATAGGTCTGCCATGCCGGACTCTTTTACCAATCATTTTGAGTGGTACTCCAATGTGCTAAGCAATGTGGTTCTTGACCTTCAAAGAGAAGGTAATGGTGGAGGAGGTGAAGAGAGGATCATTTATGGTTATCGGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGTTGAGAGGCTCGAGGAAGAAGATGGGGTTGTGGCCATTTTTCCTGAGATGAAGTACGAGCTTCATACCACTAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGATAGCAACAGCGCCTGGTCTCAACAAATTGCAGACCATGATGTGGTTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGACAGCTTTGACGATGCAGGAATGTCGGCAGTGCCGGCGCATTGGAAGGGGGAATGTGAAACAGGGAGAGGGTTTACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTTTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAACAGTTGGAGTACAAATCGCCGAGGGATCAAGATGGGCATGGAACTCACACGGCAGCTACCGTCGCTGGCTCTCCGGTGGCCGGTGCAAGTCTTCTTGGTTATGCTTATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGGATTGCAGCTTACAAGGTCTGTTGGATTGGTGGCTGCTTTAGCTCTGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCTATCTCTTTGGGAGGTGGGGTTTCTTCGTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGGGCAATGGAAATGGGCGTGTTTGTTTCTTGCTCGGCTGGAAATGGAGGGCCGGACCCTGTCAGTCTCACGAATGTATCACCATGGATAACCACCGTCGGTGCCAGTACAATGGACAGAGATTTCCCCGCCATTGTCAAGCTCGGCGATGGCAGAACAATTACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAACAATTCCCAGTTGTCTACATGGGGAGTAACTCTAGCAGCCCTGATCCGAGCTCGCTCTGTTTAGAGGGAACTTTAGATCCCCATTTCGTTGCCGGAAAAATTGTGATATGTGATCGGGGAATTAGCCCTCGGGTCCAGAAGGGTGTGGTGGTAAAAAATGCGGGTGGGATTGGGATGATTCTGTCGAACACGGCGGCAAATGGGGAAGAGCTTGTTGCCGATTGCCATTTAGTACCGGCTGTCGCCATTGGGGAAAGAGAAGGCAAAGCAATTAAACAGTATGCATTAACGAATCGAAGAGCGACGGCGACATTAGGATTTTTAGGGACAAGATTAGGGGTAAAACCGTCGCCGGTGGTGGCGGCGTTTTCATCTAGAGGACCAAATTTCCTCACTCTTGAGATCCTAAAGCCGGATCTGGTGGCTCCTGGCGTTAACATCCTTGCCGCTTGGACCGGAAAAACAGGACCGTCGAGCTTAACGACGGACACAAGAAGGGTCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGCGGCGTAGCGGCTCTAATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATTAAATCCGCACTGATGACCACCGCTTACGTTCACGACAACACATACAAACCTCTGAAAGACTCCTCCGCCGCATCACCGTCAAGTCCATACGACCATGGCGCCGGCCACATAAATCCTAGAAAAGCCCTAGATCCTGGTTTGGTTTACGTAATTCAGCCGCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAAGCCCAACACAGCTCAAAGTCTTCTCAAAATATTCAAACAGAACATGCCGTGGTCTTCTCCCCAACCCAGGAGACTTGAATTACCCAGCAATCTCCGCCGTTTTCCCTGAGAAAACCTCCGTCACTTCGCTGACCCTTCACAGAACCGTCACCAATGTCGGCCCTGCAACCTCCAGTTACCATGCGGTGGTGAGTCCGTTCAAGGGGGCCACCGTGAAAGTTGAGCCGGAGAGTCTGAATTTCACAAGAAGGTATGAAAAGGTTTCTTATAGAATCACTTTTGTGACGAAGAAGAGACAGAGCATGCCGGAATTTGGAGGGTTGATTTGGAAGGATGGAAGTCATAAAGTGAGAAGCCCCATAGTGATTACTTGGTTGTCGTTTGTTTGA 2322 49.01 MADSPLKCLCFLLFLDSFLLSSALFLKTYVVQMDRSAMPDSFTNHFEWYSNVLSNVVLDLQREGNGGGGEERIIYGYRNVFHGVAARLSEEEVERLEEEDGVVAIFPEMKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVVVGVLDTGIWPESDSFDDAGMSAVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWIGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDGRTITGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLVPAVAIGEREGKAIKQYALTNRRATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYVIQPQDYFDFLCTQDLSPTQLKVFSKYSNRTCRGLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGPATSSYHAVVSPFKGATVKVEPESLNFTRRYEKVSYRITFVTKKRQSMPEFGGLIWKDGSHKVRSPIVITWLSFV* 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6403519 6405840 + Chy6G114160.1 Chy06g00888 228597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00888 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 767 IPR045051 -
Chy06g00888 773 PANTHER XYLEM SERINE PROTEINASE 1 19 767 - -
Chy06g00888 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Chy06g00888 773 Gene3D - 347 491 - -
Chy06g00888 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Chy06g00888 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Chy06g00888 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Chy06g00888 773 CDD PA_subtilisin_like 354 483 - -
Chy06g00888 773 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Chy06g00888 773 Pfam Subtilase family 140 593 IPR000209 GO:0006508|GO:0008236
Chy06g00888 773 CDD Peptidases_S8_3 111 588 IPR034197 -
Chy06g00888 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Chy06g00888 773 Gene3D - 639 770 - -
Chy06g00888 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Chy06g00888 773 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252|GO:0006508
Chy06g00888 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
Chy06g00888 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252|GO:0006508
Chy06g00888 773 Pfam PA domain 381 469 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01581 Chy-Chr3:17863086 Chy06g00888 Chy-Chr6:6403519 0 dispersed
Chy06g00888 Chy-Chr6:6403519 Chy11g00264 Chy-Chr11:2467378 0 dispersed
Chy06g00888 Chy-Chr6:6403519 Chy09g01158 Chy-Chr9:13808660 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00888 - - csv:101214825 1478.38