Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00900 ATGGCAAAAGGTGCATCACTTTTGTTCCTAATTATGATGGTTTGTCTGTCGGAAGCAGCTCTTGATAGCCATTATTACTCAAAAACGTGTCCCAATGCAGAAAATATCATTCTTCAAACCGTCTACAATGCTTCCATTCATGACCCCAAAGTCCCTGCTCGTCTTCTTAGACTCTTCTTTCATGACTGTTTCATAAGGGGATGTGATGGGTCGGTGTTGATAGACTCGACACCAGAGAACCAGGCGGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCATTCTATGTGATAGATGAGGCCAAAGCCAAGCTTGAAAGTTCATGCCCACATACTGTTTCTTGTGCTGATATTGTTGCTGTTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCAAAGGCTTCTGACACCATCAACTTGCCAGCTCCAACTTTCAATGTCTCCCAACTCATTCAGAGCTTTGCAAATAGAGGATTAGAAGTTAAGGACATGGTTGCTCTATCTGGGGCTCACACAGTTGGATTCTCACACTGTTCTTCCTTTCAATCTCGACTTCGAAACTTCAGCGCGACTCATGAAATTGATCCTACTTTGGAATCTGGGTTTGCTCAAATTCTAAGAAACAAATGTCCAAAACCAAACGTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCTGATCAAGCTCTGTTTGTTGATTCTAGAACTAGAGGGCTTGTTGGGTTGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTTGCAGCTTCAATGGTGAATTTGGGTAATGTTGGGGTAATTCAGAATGGAAATGTCAGAATCAATTGCCGGGTGCCAAACTAA 951 42.48 MAKGASLLFLIMMVCLSEAALDSHYYSKTCPNAENIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDGSVLIDSTPENQAEKDAPPNISLRSFYVIDEAKAKLESSCPHTVSCADIVAVAARDVVTLSGGPYWSVLKGRKDGKISKASDTINLPAPTFNVSQLIQSFANRGLEVKDMVALSGAHTVGFSHCSSFQSRLRNFSATHEIDPTLESGFAQILRNKCPKPNVDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFVDSRTRGLVGLFAQDQNLFFKEFAASMVNLGNVGVIQNGNVRINCRVPN* 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6580789 6582947 - Chy6G114280.1 Chy06g00900 228609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00900 316 Gene3D Peroxidase, domain 2 156 297 - -
Chy06g00900 316 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PANTHER PEROXIDASE 25-RELATED 7 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Chy06g00900 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy06g00900 316 Gene3D - 24 316 - -
Chy06g00900 316 PANTHER PEROXIDASE 66 7 314 - -
Chy06g00900 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01036 Chy-Chr3:13880093 Chy06g00900 Chy-Chr6:6580789 1.06E-126 dispersed
Chy06g00900 Chy-Chr6:6580789 Chy08g00310 Chy-Chr8:7301002 1.14E-96 dispersed
Chy07g00309 Chy-Chr7:2546214 Chy06g00900 Chy-Chr6:6580789 1.98E-82 dispersed
Chy09g00313 Chy-Chr9:2677518 Chy06g00900 Chy-Chr6:6580789 1.66E-87 dispersed
Chy06g00900 Chy-Chr6:6580789 Chy01g00415 Chy-Chr1:2928050 2.25E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00900 K00430 - csv:101210306 613.994