Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00918 ATGGCATCTTCTCGTCTGACAGGAGGATTAGCTCAGTCTCCATCGAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCCCCAGCTATTGTCAATTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCTGTTTCCGGAGACATGAACAATGCAGTTTTAGATAGTGTGGCTAATTCAGGACCCAGTGTGGGTGCAAGTTCTTTAGTTACAGATGCGAACTCCGCTCTTTCAGGGGGACCGCATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGCTTGCCCGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTGTCAGGGTCCTCAGTTATAGATGGATCATCCTGCGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACATGCAGCAACAGGCACAGCAAGGTGCTTCACATGCCACATCCTTACCAACACCACAAATAGGCCAAGCATCACTTCCGATGGGCACTAAACATCAGGGATCTTTCATTCCAGATCCAAATAGTTATTCCCAGGTGCAGAAAAAACCACGACTGGATTTAAAGCCGGAAGATGTGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACCGGATTCCATGCAGCCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAGCAGCAAGGAATGCGGCAGCAGCAGCAAATTTTGCAGTCTCTACCTCAATACAGGGCTCAGTTTCAGCAACAGCAGCAGATACAGTTGAGGCAGCAAATGCAACAGCAGGCTATGCAACCTGTATCACTCATAAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATACCATCAGCGGCAAAGACCTCCTGAGAATAGTATAGCCTACTGGAGAAAGTTCGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCGTGGCAATGCGACATCTGCGGTTCTAAATCAGGAAGGGGATTTGAGGCTACATTTGAAGTACTCCCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTGTTGATGAGCTTTTATTTCTGGACCTTCCTCAAGAAAGGAGATTTGCTTCTGGAATTATGATGTTAGAATATGGAAAAGCAATTCAAGAGAGTGTATACGAGCAACTTCGTGTCATTCGTGAGGGTCAGCTTCGTATCGTATTCACACAAGACTTGAAGATTTTGTGTTGGGAATTTTGTGCTCGGCGTCATGAAGAACTTCTTCCACGGAGGTTGGTTGCACCTCAGGTAAATCAGCTGGTACAGGTTGCCCAGAAATGTCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAATTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTCAGGTGTTTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATAAAAAAGTTGGGCCTATTGAGGGCTTGAAGAATTATCCTAGACATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGTGAGTATTCAAGGTCTTCCCACAGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGATGAACAACCATCAGATGATTGGTCGAGGAGGTTTCAGTGGTTCAGCACAAGCTGCTTTGGCAATGACCACATACCAGAATATCCTCATGAGACAGAACTCTATGAACTCCAACCCCAGCCCACATCAACAGGAGGCCTCCTCTTCTTTCAATAACTCTAACTATAATCCATCCCCTACACTTCAGGGGTCTACATCCCTGATACCTGGCTCGGTGCAGACCTCCTCTGTTGGTGGTTTTCCAGGCATCCAGCAACCCTTGCAAAAGCAATCGCAGCCGCCGCTGCAACAGCATCCGCCAAATGCTGGAACCTTGGTCCAACAAAATCATCCTCAGATGATGCAAGGTAGCCAGGCCCTACAACAACAGATGATCCAGCAACTATTGCAGATGTCAAATAACAGTAAAAGTGGTAGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTATACCAAGAAGGGGTATGGCTTATGTAGGCAACACTTCAGTTCCAGCTGGGGCATCTGGAAATCTATCTGGTAGCAACGTCCCTGGTCCAAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAATCCTCTGCTGGTAACAGTGCATTCGATCAAAAGGCTTCTGATTTGCCACAACTACATTTTCCCGAGAGTTTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAGCGGGTTTATTAACAATGAGCTTGATGAGGATTTGGGTTATGTGTGGAAGGCTTGA 2556 45.54 MASSRLTGGLAQSPSSSGIFYQGEGQSPAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLDSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSSCVVQQNSQQDQNIQHMQQQAQQGASHATSLPTPQIGQASLPMGTKHQGSFIPDPNSYSQVQKKPRLDLKPEDVLQQQVLQQLFQRPDSMQPQNRNSQLQALFQQQGMRQQQQILQSLPQYRAQFQQQQQIQLRQQMQQQAMQPVSLIKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVVDELLFLDLPQERRFASGIMMLEYGKAIQESVYEQLRVIREGQLRIVFTQDLKILCWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDKKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLVSIQGLPTDRNTINKLMTLHPELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNSNYNPSPTLQGSTSLIPGSVQTSSVGGFPGIQQPLQKQSQPPLQQHPPNAGTLVQQNHPQMMQGSQALQQQMIQQLLQMSNNSKSGSLQQQPLTGPNANRSIPRRGMAYVGNTSVPAGASGNLSGSNVPGPSRSNSFKAASNSESSAGNSAFDQKASDLPQLHFPESLVEDIGQDFPESGFINNELDEDLGYVWKA* 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6757636 6762796 + Chy6G114460.1 Chy06g00918 228627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00918 851 MobiDBLite consensus disorder prediction 775 811 - -
Chy06g00918 851 MobiDBLite consensus disorder prediction 737 757 - -
Chy06g00918 851 Pfam LIM-domain binding protein 294 554 IPR029005 -
Chy06g00918 851 PANTHER LIM DOMAIN-BINDING PROTEIN 185 844 IPR029005 -
Chy06g00918 851 PANTHER LIM DOMAIN-BINDING PROTEIN 5 153 IPR029005 -
Chy06g00918 851 MobiDBLite consensus disorder prediction 1 22 - -
Chy06g00918 851 MobiDBLite consensus disorder prediction 636 710 - -
Chy06g00918 851 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 185 844 - -
Chy06g00918 851 MobiDBLite consensus disorder prediction 737 753 - -
Chy06g00918 851 MobiDBLite consensus disorder prediction 139 192 - -
Chy06g00918 851 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 153 - -
Chy06g00918 851 MobiDBLite consensus disorder prediction 775 819 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00918 Chy09g00919 CCT
Chy06g00918 Chy09g00919 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00918 Chy-Chr6:6757636 Chy09g00919 Chy-Chr9:11983160 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00918 - - csv:105434391 1464.9