Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00952 ATGAGTCCGACCGCCGTCGAAGCTCCATTACTTCTTCTTTTTTTTCTTGCCGCAGCGCTCCTGTGCCCGCTCGGAGGAGCCAGGCTTCTGGTGGAGATGACGGTGGTACGAAACGCCTCTTCCATCGGAGCTCTTTGTTTGGACGGAAGCTTGCCGGCTTATCATCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTCTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTAACGTCTTGTTTTGAGAGAGCGAGTAGTCGAAGAGGATCAACACATCTGATGACCAAATGGGAAGATTTTTCTGGTATTCTTAGCAACAATGCTTCTCTTAACCCAGACTTTTATAATTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGCTGGAGATGCCTTGTTTGATAACGGGACATCAGTGCTTCATTTCAAAGGTCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAGGAAGGCTCTGCTTTCTGGTTGCTCTGCTGGAGGTTTAGCAACTTTTCTGCATTGTGAAAATTTCACTAATTATTTGCCAAGAAATGCAAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGACATAGGTTTAAATCACACCATGAGGAACTTTTATAAGGATCTTGTGGCTCTTCAGGGAATGGAGCGAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTACAGAATTGTGCATATTCCCTCAATATTCTTTGAAGTACATAACAACACCATTTTTCATTCTCAATTCAGCATATGATGTTTTCCAATTTCATCATGGGTTGGTGCCACCATCTGCTGATTTACATGGACATTGGAACCATTGCAAATTAAATCCAGCAGACTGTAGTGAACTACAGATCCAGGTACTGCAAGGTCTAAGACTCAGTATGCTCTCTGCATTAAGATTATTCCATGAATATTCAAGCAGAGGAGGAATGTTCATAAATTCATGTTTTGCCCATTGCCAAAGTGAGTCCCAAGACACATGGTTTGCACCTGACTCCCCAACAATAGACAACAAGACGATAGCAGAAGCAGTTGGTGATTGGTACTTTGGGAGGAGAAACATAAAGGAAATAGACTGTGCTTATCCATGTGATTCTTCTTGCCATAACATTATACCATAA 1194 43.38 MSPTAVEAPLLLLFFLAAALLCPLGGARLLVEMTVVRNASSIGALCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVTSCFERASSRRGSTHLMTKWEDFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDALFDNGTSVLHFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTNYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMERNLNENCTASSYFTELCIFPQYSLKYITTPFFILNSAYDVFQFHHGLVPPSADLHGHWNHCKLNPADCSELQIQVLQGLRLSMLSALRLFHEYSSRGGMFINSCFAHCQSESQDTWFAPDSPTIDNKTIAEAVGDWYFGRRNIKEIDCAYPCDSSCHNIIP* 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6988965 6997185 - Chy6G114800.1 Chy06g00952 228661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00952 397 PANTHER NOTUM-RELATED 27 397 IPR004963 GO:0016787
Chy06g00952 397 Pfam Pectinacetylesterase 28 377 IPR004963 GO:0016787
Chy06g00952 397 PANTHER PECTIN ACETYLESTERASE 9 27 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00952 Chy-Chr6:6988965 Chy08g01082 Chy-Chr8:17979138 1.18E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00952 K19882 - csv:101216160 807.364