Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00957 ATGCCTTCATGGTGGGGGAAGTCGTCCAAAGACGTGAAGAAGAAAACAGGTAAAGAAAGTTTCATCGACTCGTTACACCGAAAGTTTAAGAATTCACCTGAAGGTAAAGTAAACAGCAGATCAGGAAGTTCTCGTAAACGTGGTGGTGACACTGTATCTGAGAAGGGGTCCAAATCACCAATATCAAGATCACCATCACCTTCCAAAGAAGTAGCTAGATGTCAAAGTTTTGCTGAAAGAACGCATTCTCACAAACTTCCACTTCCAGATTTGCGACCTGTAGGTGTAGGTCGCACAGATTCTGGGATTAGTGTGGCAGCAAAATCCAAATTAGAGAGAAGCTCCAAGACATCCTCATTCCTACCCCTCCCAAGACCTGCTTGTATTCGAAGTAGGCCAGATCCTGCAGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTTTGGTGAGTCCTCAAGTGATAGTGATGATCCCAATGATTCACGTCAACGTAGTCCTCCAGCAACTGACTATGACATTGGGGCTAGAACTGTGATAGGTTCTACTGAACCTAGTGAAACTCTCAAAGATCAGTCTCCTACTGTCGTGCAAATAAATTTAAAAGAAGGCAAGAAAGCGGAAAATCTTCCATTTCCTCATAAGAATTCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTACAAGTTCCTCGTCATGGGGCCTTCTTTAGCGCACCAGATAGTTCTATGTCTAGTCCCTCTAGAAGTCCTATGAGGATATTTAGTACCGAGCAAGTCATGAACGCCGCTGTTTGGGCTGGAAAATCTCACCCAGATGTCATTTTAGGTGGATCTGGCCATTGTTCTAGCCCTGGTTCTGGTCACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCGGGCCACTTCTTTTGGCAACAAAGTAGGGGTAGCCCTGAATATTCTCCTGTACCTAGTTCCAGAATGACTAGTCCTGGTCCTAGTTCCAGAATTCAAAGCGGTGCTGTCACACCTATTCATCCTAGAGCAGGAGCTCCACCTGCTGAGTCACAAACATGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATAGCAATCTCAATCTCTTCTCCATTTTCGCATTCGAATTCGGCAGTGACATCTCCTTCAGTGCCTAGAAGTCCAGGAAGGACAGAGACTCCAGCAAGCCCAGGTCCACGCTGGAAAAAGGGGAAGCTACTGGGTCGGGGCACATTTGGGCATGTATATGTCGGTTTTAATAGCGAAAGTGGAGAGATGTGTGCAATGAAGGAGGTCACATTATTTTCTGATGATGCGAAGTCTAGGGAAAGTGCTAAGCAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTGAGGCATCCCAACATCGTGCAGTATTATGGTTCCGAAACAGTGGGTGATAAATTCTATATATATTTGGAATATGTATCTGGTGGTTCCATTTATAAATTACTTCAAGAGTATGGACAATTTGGGGAACTAGCAATCCGTAGCTATACTCAACAAATACTATCAGGACTTGCATATTTGCATGCTAAAGCTACAGTGCACAGGGATATTAAAGGAGCAAACATACTTGTTGACCCAAACGGTCGTGTTAAACTGGCAGACTTTGGGATGGCGAAGCATATCACAGGTCAATCATGTCCACTATCGTTTAAGGGTAGCCCTTACTGGATGGCACCTGAGGTGATAAAGAACTCAAATGGTTGCAACCTTGCCGTTGATGTTTGGAGTCTTGGATGTACTGTTCTGGAGATGGCTACTACAAAGCCACCATGGAGCCAGTACGAAGGGGTTGCTGCGATGTTTAAGATTGGTAACAGCAAGGAACTCCCTGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTTAGACTATGTCTGCAACGAAATCCACATCATCGACCTACAGCTGCTCAACTCTTGGAGCATCCTTTTGTCAAACATGCTGCACCTGTAGAGAGGCCTATTTTGAGCTCTGAACCTTCTGATACAACTCCTGGAGTTACAAACGGAGTGAAGATTTTGGGTATTGGTCAATCACGGACTACTTCTATGGACTCGGATGGTAGACTTGCAGTTCATTCTTCAAGAGTCTCAAAAGCTGTTCTTCATGCCAGTGAAATCAATATTTCCAGAAACATATCATGTCCTGTTTCGCCAATCGGAAGCCCTCTTTTGCATTCACGATCTCCTCAACACCCTAGTGGAAGAATGTCTCCTTCACCCATTTCAAGTCCACGAACCATGTCGGGATCATCCACACCTTTGACAGGATGTGGTGGTGCAATTCCTTACAACCACCTGAAACAAACTATATACTTGCAAGAGGGATTTGTAAGCATGCCAAAATCCTTAAATAGCAGTCCATACAGCAGCGGTATCTCCTTCCATGATTCAAATCCCGATATTTTCCGAGGGTTGCAGCCTGGGGCTCACATTTTCTCTGAAATGATACCAGAAAACGAAGTCTTGGGAAAGCATATCGGACGGCCTGCTTACAGTGAAGTGTATGATGGCCAACACATTTTGGCCGACCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAATCCTTCTCTTGATTTGAGTCCTAGCGCTACATTGTCCAGCCGCATGAATGGTATTTGA 2691 44.78 MPSWWGKSSKDVKKKTGKESFIDSLHRKFKNSPEGKVNSRSGSSRKRGGDTVSEKGSKSPISRSPSPSKEVARCQSFAERTHSHKLPLPDLRPVGVGRTDSGISVAAKSKLERSSKTSSFLPLPRPACIRSRPDPADLDGDLVTGSVFGESSSDSDDPNDSRQRSPPATDYDIGARTVIGSTEPSETLKDQSPTVVQINLKEGKKAENLPFPHKNSSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRIFSTEQVMNAAVWAGKSHPDVILGGSGHCSSPGSGHNSGHNSMGGDMAGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQTCWPDEKQTHRLPLPPIAISISSPFSHSNSAVTSPSVPRSPGRTETPASPGPRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSRESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKFYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKATVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDVWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPHHRPTAAQLLEHPFVKHAAPVERPILSSEPSDTTPGVTNGVKILGIGQSRTTSMDSDGRLAVHSSRVSKAVLHASEINISRNISCPVSPIGSPLLHSRSPQHPSGRMSPSPISSPRTMSGSSTPLTGCGGAIPYNHLKQTIYLQEGFVSMPKSLNSSPYSSGISFHDSNPDIFRGLQPGAHIFSEMIPENEVLGKHIGRPAYSEVYDGQHILADRVSRQLLRDHVKTNPSLDLSPSATLSSRMNGI* 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7050402 7055710 - Chy6G114850.1 Chy06g00957 228666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00957 896 MobiDBLite consensus disorder prediction 1 175 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 55 71 - -
Chy06g00957 896 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Chy06g00957 896 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 813 - -
Chy06g00957 896 SUPERFAMILY Protein kinase-like (PK-like) 407 749 IPR011009 -
Chy06g00957 896 SMART serkin_6 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00957 896 Gene3D Transferase(Phosphotransferase) domain 1 408 684 - -
Chy06g00957 896 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 813 - -
Chy06g00957 896 Pfam Protein kinase domain 410 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00957 896 MobiDBLite consensus disorder prediction 378 411 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 312 339 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 742 776 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 378 398 - -
Chy06g00957 896 ProSiteProfiles Protein kinase domain profile. 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g00957 896 MobiDBLite consensus disorder prediction 312 357 - -
Chy06g00957 896 CDD STKc_MEKK1_plant 408 665 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 744 776 - -
Chy06g00957 896 MobiDBLite consensus disorder prediction 8 53 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00957 Chy09g01038 CCT
Chy06g00957 Chy09g01038 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01058 Chy-Chr2:7270531 Chy06g00957 Chy-Chr6:7050402 3.18E-134 dispersed
Chy06g00957 Chy-Chr6:7050402 Chy09g00569 Chy-Chr9:6250326 4.44E-81 dispersed
Chy01g01665 Chy-Chr1:22598960 Chy06g00957 Chy-Chr6:7050402 1.38E-16 transposed
Chy03g00397 Chy-Chr3:5529719 Chy06g00957 Chy-Chr6:7050402 2.14E-19 transposed
Chy05g00204 Chy-Chr5:1724758 Chy06g00957 Chy-Chr6:7050402 3.53E-35 transposed
Chy05g00223 Chy-Chr5:1844743 Chy06g00957 Chy-Chr6:7050402 1.38E-85 transposed
Chy05g01114 Chy-Chr5:15678396 Chy06g00957 Chy-Chr6:7050402 6.42E-80 transposed
Chy06g00957 Chy-Chr6:7050402 Chy09g01038 Chy-Chr9:12879506 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71327 PF00069 Pkinase 7.40E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00957 K20717 - csv:101214961 1672.14