Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g00974 ATGGCGTCCGGCCTCTCCGCCGCCACTCTCCCCAAACCATTCCATCTCTTCCTTACTTCCTCCCATCTCTACCCTAAACCTCCAACTCCTTTTCTTTTTCCACCTTCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGCAGAAAAACTTTGCTCACTGTCTGCGTACTCGTTGAGCGTCAAAATAGTTCCGGCGAGGTAGACAATCTCTCCGATGAAGAATCGCCGATTGTAGTTCCTCAGATCCCATCGCCTCACGTTTCCGAAAGATTAGCTAGGAAGAAATCGGAGCGTTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTCGGAATTACATCCATGGCTGTCATGGCGGTTTATTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGCATGGAGTTCTGGGCAAGATGGGCTCATAGAGCTCTTTGGCACTCTTCCTTATGGCATATGCACGAGTCGCATCATAAACCAAGAGAAGGACCATTCGAACTGAACGATATTTTCGCCATAATCAACGCTGTGCCGGCCATAGCTCTTCTTTCATACGGGTTCTTCCATAAAGGGCTTGTTCCTGGACTCTGCTTTGGCGCAGGTCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCTGTGGGTCCCATTGCCAACGTCCCTTACTTCAGAAAGGTTGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAATGGTGTCCCATACGGGCTTTTTTTGGGTCCTAAGGAATTAGAGGAAGTGGGAGGGTTAGAAGAATTGGAGAAGGAAATCAACAGAAGAAGAAAATGGACGGCTCCAAAATCAATAGATGTCCAAATTTTAAAAAACAAAAATGTAAAACGGGTAGATTTTGAAATTCTTATTCTATTCTATAATACGGTGAGGAGCTGGAGCCGTGTAAGGAAGAAAATTGGAGAAAAGGAAAAAGGAAACGAGAGTTCACACTTTGCTTTACACGCAATGGATGACCTACGCCTTTCAACTTTCTCTTTCAGTTTCTTCCTGCCGGTGCCGCCACAAAACCATCTCCTCCGATTTTTTTCCGAGCCGGCATGGCCACTCCAGCCCATCCAAGTTGGGCCCAAGCGCCCCCCGTCTAGAAACGAGGCATGTGAAAAATCGCTATGGGCTGAAAAACCTTATGTTTCAAATTTGGGCCTTGAAGAAAATTTGACTGTCGATCCATTTCCTATTTGTAAATTCGGGCGGAAATCCCCGTCGACGGCACCAAGTCGCTCCCCCCATGCTTGCCGTTCATTTCTCGGTGCCACTTCCCCTACTCACAGAACTGAGCGTTTTCGTAACTCAAACAATTCTTAG 1434 47.07 MASGLSAATLPKPFHLFLTSSHLYPKPPTPFLFPPSVFRNSRFQWKMRRKTLLTVCVLVERQNSSGEVDNLSDEESPIVVPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRRKWTAPKSIDVQILKNKNVKRVDFEILILFYNTVRSWSRVRKKIGEKEKGNESSHFALHAMDDLRLSTFSFSFFLPVPPQNHLLRFFSEPAWPLQPIQVGPKRPPSRNEACEKSLWAEKPYVSNLGLEENLTVDPFPICKFGRKSPSTAPSRSPHACRSFLGATSPTHRTERFRNSNNS* 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7188661 7196392 - Chy6G115020.1 Chy06g00974 228683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g00974 477 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 16 301 IPR045019 GO:0016491
Chy06g00974 477 MobiDBLite consensus disorder prediction 441 477 - -
Chy06g00974 477 PANTHER BETA-CAROTENE HYDROXYLASE 16 301 - -
Chy06g00974 477 MobiDBLite consensus disorder prediction 444 477 - -
Chy06g00974 477 Pfam Fatty acid hydroxylase 149 276 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00974 Chy-Chr6:7188661 Chy09g01257 Chy-Chr9:14586519 2.01E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g00974 K15746 - csv:101212140 602.823