Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01051 ATGGGCAGCATTGAATCAGAAAGAACTGTTACAGGTTTCGCCGCCAAAGACCCATCTGGGATTCTCTCTCCTTATACTTACACTCTCAGGTCTTCTTCCTTTTTCCTCTCTCCCTCTTCTCCTTCTTCATCCCTCTCACTCCTCCCCCTTTCTTTCTTTTTCTTTTTCTTTTGCAGAAACACCGGTCCCCAAGATGTTTTCATCAAAGTCATTTGCTGTGGAATCTGCCACTCTGATCTTCACCAAGTCAAGAACGAGCTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAAGTTGTCGGAGAAGTGGTGGAGCTTGGATCGGAAGTGGATCGTTTCAGAATTGGGGAATTGGTTGGAGTTGGGTGTATTCTTGGATCTTGTTCCACTTGTAGTCCTTGTAACACCGATAAGGAGCAGTACTGTCATAAGCGAATCTGGACTTATAATGATGTGTATCACGACGGCCGTCCCACCCAAGGCGGTTTCTCCTCTGCCATGGTCGTCCACCAAAAGTTTGTTGTAAGAATCCCAGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGCTGTGCGCGGGAGTGACGGTGTACAGCCCATTGAGTCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGACTGGGCGGCGTTGGACATATGGGTGTGAAAGTGGCAAAGGCTTTGGGCCATCACGTGACGGTGATAAGCTCGTCGGAGAAGAAAAGAGAGGAGGCTCTGGAACATCTCGGTGCCGACGATTACTTGGTCAGCTCCGACAAGGCTCAAATGGACAGAGCCATTGACTCACTCGATTACATTATCGACACCGTCCCTGTTTTTCATCCGCTGGAGCCATATCTGTCGCTGCTAAAACTCGACGGCAAATTGATCTTGATGGGTGTCATTAATACTCCATTACAATTTGTTTCCCCTCTCCTTATGATCGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGTATGAAAGAGACGCAAGAAGTATTGGATTTCTTTAAAGAGAAGGAACTGACGTCCATGATTGAAGTGATAAAGGTTGATTACATAAACAAGGCTTTCGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTGGTCGACGTTGCCGGAAGTAAGATGCCTCAGTGA 1161 48.32 MGSIESERTVTGFAAKDPSGILSPYTYTLRSSSFFLSPSSPSSSLSLLPLSFFFFFFCRNTGPQDVFIKVICCGICHSDLHQVKNELGMSNYPMVPGHEVVGEVVELGSEVDRFRIGELVGVGCILGSCSTCSPCNTDKEQYCHKRIWTYNDVYHDGRPTQGGFSSAMVVHQKFVVRIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADDYLVSSDKAQMDRAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMIGRKTITGSFIGSMKETQEVLDFFKEKELTSMIEVIKVDYINKAFERLEKNDVRYRFVVDVAGSKMPQ* 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8455836 8457268 + Chy6G115790.1 Chy06g01051 228760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01051 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 97 111 IPR002328 GO:0008270|GO:0016491
Chy06g01051 386 PANTHER ALDEHYDE REDUCTASE 5 32 - -
Chy06g01051 386 SUPERFAMILY GroES-like 61 210 IPR011032 -
Chy06g01051 386 PANTHER ALDEHYDE REDUCTASE 55 386 - -
Chy06g01051 386 SMART PKS_ER_names_mod 46 377 IPR020843 GO:0016491
Chy06g01051 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 182 347 IPR036291 -
Chy06g01051 386 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 32 - -
Chy06g01051 386 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 55 386 - -
Chy06g01051 386 Pfam Zinc-binding dehydrogenase 220 343 IPR013149 -
Chy06g01051 386 Gene3D - 58 378 - -
Chy06g01051 386 CDD CAD1 11 378 - -
Chy06g01051 386 Gene3D - 193 349 - -
Chy06g01051 386 Pfam Alcohol dehydrogenase GroES-like domain 64 177 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01051 Chy-Chr6:8455836 Chy11g00067 Chy-Chr11:729780 9.67E-116 dispersed
Chy02g00772 Chy-Chr2:4786533 Chy06g01051 Chy-Chr6:8455836 3.32E-115 transposed
Chy01g00100 Chy-Chr1:657397 Chy06g01051 Chy-Chr6:8455836 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01051 K00083 - csv:101222395 673.7