Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01055 ATGATTCACACCAACAAACCATGCCTCTTTCTTGCTCTCTTTTCCACTTTCACTTTCTTTTTCCCTTCTTTTGCTCTCAACACCGATGCCACTCTCTTGATTTCTCTCAAACGCTCCATTCTCGGCGATCCCTTGTCTGTTTTCGCTAATTGGAATGTCTATGACGATACCCCTTGCTCCTGGCTTGGAGTTACCTGCACCGACCTTCGAGGCTATGGCGGCGGATGGTCAGATTTCCTCAGAGTCACTGCTCTCTCCCTCCCCAACAGCCAACTTCTGGGTTCCATTCCTGATGAGCTTGGAAGGATCGAACACCTTCGTCTTCTCGATCTTTCTGGTAATTTCTTTAATGGGTCTCTTCCCTTTACTATTTTTAATGCTTCAGAGCTTCGGATTCTCTCTCTTTCCAACAATGTTATTTCCGGCGAGTTGCCGATCGACATTGGGGGTTTGAAGAGTCTTCAGGTTTTGAATCTCTCTGATAATGCGTTGGCTGGGAAAGTGCCCCAAAATCTTACTGCTCTGAAGAATCTTACTGTCGTTTCTCTGAGGAGTAATTACTTTACCGGAGAAATTCCGAGGAACTTTAGTTCCGTTGAGGTTTTGGATCTGTCTTCGAATCTGTTTAATGGGTCTCTGCCAGCGGATTTTGGTGGGGAGAAACTTCGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTTCTATTCCGTTGGAGTTCGCTAAGAGGGTTCCAGTGAATGTGACTATGGATCTTTCTTTTAATAACCTCACCGGAGCGATTCCTCAGTCGATTGCTCTGCTCAGCCAGAAAGCAGAGGTGTTTGCCGGAAATGAAGATCTCTGTGGGAAGCCATTGAAACATCTCTGTTCAATTCCTTCTTCACTCACAACTCCCCCCAATGTTTCTGAAACTTCATCTTCTTCTCCAGCCATCGCCGCCATACCCAAAACAATAGGCTCTGTTCCGGCAACACAGTCCCCCAGAGGTCCAAACGATACACAAACTTCTCAGCCACAAAACACCATGAAACCCATCACAATAGTTGCAATAACCGTCGGAGACCTCGCCGGTATCGCCATTCTTGCCGCAGTGATTCTGTACGTCTACCATTACCGGAAACATAAAACCCCCAGTTTCAAAACCGCAAAATCCACCTACAAGAAACGGACGATTGACTCAGAAAAAAACCCTCAAACTAATCAGAAAAAACCCTCATCATCAGTGTTGTTCTGTTTAGCCAACAAAGGAGAAGAGACATCAGAGGCGACGAGTTCTTCCGACGGCGAAGAACAGAGAGAGAAACCCGGAATGACCCAGGACAGAGAGAACAGAGACAATAAGAAGAACGGGGTACTAGTGACAGTGGACGGAGAAACAGAGCTGGAATTGGAAACTCTGTTAAAGGCATCGGCGTATATAGTTGGAGCAAGCGGGGGGAGCATCGTGTACAAGGCGGTGCTGGAGGACGGGACGGCGTTGGCGGTGAGAAGAATCGGCGACGTGAGCGTGGAGAGATTGAGGGATTTTGAGAGCCAAGTGAGAGGGATTGCTAAAATTCGACATCAAAATTTGGTGAAAATTCGAGGGTTGTTTTGGGGAGAAGATGAGAAGCTCATCATCTATGATTATGTCTCAAATGGCTGCCTTTCAACTTCCCTTCACAGAAAACCGAGTTCATCGTCTTCTTCCCAGAGCCACCTATCGTTTGAAGTCCGATTAAAAATTGCCAGAGGAATCGCCCGAGGACTTGCCTTCATCCACGACAAGAAGCACGTCCATGGCAACCTCAAGCCTTCCAACATCCTCTTAAACGCCGAAATGGAGCCCTTAATCGCCGATCTCGGTCTTGACAAGGTCCTCTCCGGCAGGTCCAAGATCGCAATCCCCTCCACTTCTGCACGGAACTTGGGCAGCCATAGATCCACCCCGAATCGCGAAAACCAAGACGGGAGCGGCGTTGGAAGCCCGTCTGTGAGCCTGGGATCAGCGTACCAGGCGCCGGAATCGCTGAAGAATGTGAAATCGAGTCCTAAATGGGACGTGTACTCGTTCGGAGTGATTCTAGTGGAGCTTGTGAGTGGGAAGATTGCGACGGAGAGAGAATTTGGGAGTGGTGAAGAGGAAGGGAGGATTAAGAAGATGGTGGATTTGGCGATCAGAGGGGAAGTGGAAGGGAAAGAAGAAGCGGTAATGGGGATATTTAGATTAGGGTTTAGTTGTGTTAATTTGGTGCCTCAAAAGAGACCCACCATGAAAGAGGCTCTCCAAGTTCTTGACAAAATTGCTTCTTCTATCACCTAA 2304 47.57 MIHTNKPCLFLALFSTFTFFFPSFALNTDATLLISLKRSILGDPLSVFANWNVYDDTPCSWLGVTCTDLRGYGGGWSDFLRVTALSLPNSQLLGSIPDELGRIEHLRLLDLSGNFFNGSLPFTIFNASELRILSLSNNVISGELPIDIGGLKSLQVLNLSDNALAGKVPQNLTALKNLTVVSLRSNYFTGEIPRNFSSVEVLDLSSNLFNGSLPADFGGEKLRYLNFSYNKISSSIPLEFAKRVPVNVTMDLSFNNLTGAIPQSIALLSQKAEVFAGNEDLCGKPLKHLCSIPSSLTTPPNVSETSSSSPAIAAIPKTIGSVPATQSPRGPNDTQTSQPQNTMKPITIVAITVGDLAGIAILAAVILYVYHYRKHKTPSFKTAKSTYKKRTIDSEKNPQTNQKKPSSSVLFCLANKGEETSEATSSSDGEEQREKPGMTQDRENRDNKKNGVLVTVDGETELELETLLKASAYIVGASGGSIVYKAVLEDGTALAVRRIGDVSVERLRDFESQVRGIAKIRHQNLVKIRGLFWGEDEKLIIYDYVSNGCLSTSLHRKPSSSSSSQSHLSFEVRLKIARGIARGLAFIHDKKHVHGNLKPSNILLNAEMEPLIADLGLDKVLSGRSKIAIPSTSARNLGSHRSTPNRENQDGSGVGSPSVSLGSAYQAPESLKNVKSSPKWDVYSFGVILVELVSGKIATEREFGSGEEEGRIKKMVDLAIRGEVEGKEEAVMGIFRLGFSCVNLVPQKRPTMKEALQVLDKIASSIT* 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8493204 8496803 + Chy6G115830.1 Chy06g01055 228764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01055 767 Pfam Protein kinase domain 475 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01055 767 MobiDBLite consensus disorder prediction 426 452 - -
Chy06g01055 767 Gene3D Ribonuclease Inhibitor 26 195 IPR032675 -
Chy06g01055 767 Gene3D Transferase(Phosphotransferase) domain 1 545 766 - -
Chy06g01055 767 Gene3D Phosphorylase Kinase; domain 1 436 544 - -
Chy06g01055 767 SUPERFAMILY L domain-like 27 287 - -
Chy06g01055 767 MobiDBLite consensus disorder prediction 321 341 - -
Chy06g01055 767 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Chy06g01055 767 Gene3D Ribonuclease Inhibitor 196 292 IPR032675 -
Chy06g01055 767 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 21 764 - -
Chy06g01055 767 MobiDBLite consensus disorder prediction 380 452 - -
Chy06g01055 767 MobiDBLite consensus disorder prediction 632 660 - -
Chy06g01055 767 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Chy06g01055 767 SUPERFAMILY Protein kinase-like (PK-like) 475 760 IPR011009 -
Chy06g01055 767 PANTHER OS04G0122200 PROTEIN 21 764 - -
Chy06g01055 767 ProSiteProfiles Protein kinase domain profile. 469 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01055 767 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01055 Chy-Chr6:8493204 Chy11g00555 Chy-Chr11:6176636 0 dispersed
Chy06g01055 Chy-Chr6:8493204 Chy10g01174 Chy-Chr10:16557729 3.89E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71329 PF00069 Pkinase 7.00E-29 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01055 - - csv:101203801 1388.24