Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01078 ATGGCCGCCACCGCACTGAGTAGAGCTTTGTTTCTAATGGGGTTTCTACTATTTCTTCAACTTCAGCTTCCTGAAACAATGGCGGACTGTCCCTTGGACTTGAGTGGATCAAACTTTACTTTAGTTGCCTCTATTTGCTCTAACCCCAATGAAAGAGGGAAGTGCTGCCGCCATATCAATGCATTTGTTGCAGTTTCTGTTGCTCATCTTGCAAATGCAACAGGTGAATTGGGAGTTTCTTCAGACTTATCTGACATTTGTTTGCAATTTATACTTCAAACCATGGGACTGTATGGAGTTCCTAGAAATGCCATGGTTTTCTGTGGGGTTGGAACCAAAATTCCAGTGAACTATGCGTGTAGAGGTCGAGAGACCGTCACACAGATGCTGGAATCTCCAAAATTTACAAATGTCAGTGAAAATTGCAAGTTGCCAATAGCAGAGGAGAGTACTTGTAGGAAGTGTATTAATTCTGGAATTTTATATCTCCGAAATCTGATTGGAAGAGAAGATAATATAACATTAAATACTTGTCGTGATGCTACGTTTGTTGCACTTGCTAGCCAACTTGATCCTGCTTCAGTTATTGATCTTGCAACCTGCTTCTTTGGAGTTCAAGGCCTTAACAAGCCTCCAGCTCCACCCCCATCTTTGACCACACCAAAAATTTCCCCAAGTCCATCATCTGCTGAAAGCCCAGGGTCACTGACGCTTGATGTTGCCGGTGATAAAAGTCACCAGCATCATTCCTACCATCTAACACTAGTGGCGGGTATTGGCATCGTGGTGACTGTTGCTTCTGTAATGATGCTGGCTGTCTTGATTGTGTTGATTCGAAGGAAAAGCCGAGAGCTAAAGGATTCTGATAAGATGGATGCCATCTCTTCAAAATCTTTCCCCTCTCATCCCATCAAAAAGTATCAGGAAGGACCTTCCATGTTTAAAAAGTTCAGCTATAAGGAGATCAAGAAGGCAACAGATAGTTTTAGTACAACAATTGGTCAAGGAGGATATGGAACTGTTTATAAAGCTCAATTCACTGATGACGTAGTAGTAGCTGTGAAGAGGATGAACAAAGTCTCCGAGCAGGGTGAAGATGAATTTAGCAGAGAAATCGAGCTGCTTGCAAGATTACATCACCGACATCTTGTTGCCTTAAGAGGCTTTTGTGTTGAAAAGCATGAACGGTTCCTTGTGTACGAGTTTATGGCTAATGGAAGCTTGAAGGACCATCTTCATGCTCCTGGCAGGACCCCTCTAAGTTGGCGGACAAGAATCCAAATTGCCATCGATGTTGCCAATGCTCTGGAGTATCTTCACTATTATTGTGATCCCCCACTGTGCCACAGAGACATCAAGTCCAGCAACATTTTACTGGATGAGAACTTTGTCGCTAAGGTTGCCGATTTTGGCCTTGCACATGCTTCAAAGGGCGGTTCTGTTTTCTTCGAACCTGTAAATACAGATATCCGAGGAACGCCAGGTTATATGGATCCTGAGTATGTCATCACACAAGAACTTACTGAGAAAAGTGATATATACAGCTACGGTGTACTACTTCTGGAAATAGTTACTGGCAGACGCGCTATACAAGACGGGAAGAATCTGGTTGAATGGTCCCTAGGGTACATGATTTCAGATTCAAGGATATCTGAATTAGTAGATCCAAGTATCAAGGGTTGTTTTAACTTGGACCAACTTCACACGATCGTGTCAATTGTGAGATGGTGCACCGAGGGAGAAGGCAGGGCAAGGCCTTCAATTAAGCAGGTGCTTCGACTATTGTACGAGAGTTCAGATCCAATGCACCAAGGGCTCATGGAGGCTGTGGATGATGAAGAATATGGGGGGACTGAAGGGAGACAGAGCATGAGCAAGAGAAAAATGCATAGAAGTGATGTGATTTTCCATAGTGGAGATGGAAGGTATCTTGCTTCTTCATCAAGCACATCTAGGTCATATTGTAGTAGAAGCTTTTTACTTGAAACTGGTTCACCACAGTCTCCTCCCAATATTTATTCTGCCTCAGACCAATTATTTTAG 2043 43.17 MAATALSRALFLMGFLLFLQLQLPETMADCPLDLSGSNFTLVASICSNPNERGKCCRHINAFVAVSVAHLANATGELGVSSDLSDICLQFILQTMGLYGVPRNAMVFCGVGTKIPVNYACRGRETVTQMLESPKFTNVSENCKLPIAEESTCRKCINSGILYLRNLIGREDNITLNTCRDATFVALASQLDPASVIDLATCFFGVQGLNKPPAPPPSLTTPKISPSPSSAESPGSLTLDVAGDKSHQHHSYHLTLVAGIGIVVTVASVMMLAVLIVLIRRKSRELKDSDKMDAISSKSFPSHPIKKYQEGPSMFKKFSYKEIKKATDSFSTTIGQGGYGTVYKAQFTDDVVVAVKRMNKVSEQGEDEFSREIELLARLHHRHLVALRGFCVEKHERFLVYEFMANGSLKDHLHAPGRTPLSWRTRIQIAIDVANALEYLHYYCDPPLCHRDIKSSNILLDENFVAKVADFGLAHASKGGSVFFEPVNTDIRGTPGYMDPEYVITQELTEKSDIYSYGVLLLEIVTGRRAIQDGKNLVEWSLGYMISDSRISELVDPSIKGCFNLDQLHTIVSIVRWCTEGEGRARPSIKQVLRLLYESSDPMHQGLMEAVDDEEYGGTEGRQSMSKRKMHRSDVIFHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPPNIYSASDQLF* 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8908168 8912485 + Chy6G116060.1 Chy06g01078 228787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01078 680 SUPERFAMILY Protein kinase-like (PK-like) 307 596 IPR011009 -
Chy06g01078 680 MobiDBLite consensus disorder prediction 213 239 - -
Chy06g01078 680 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Chy06g01078 680 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Chy06g01078 680 PANTHER OS01G0750732 PROTEIN 8 674 - -
Chy06g01078 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Chy06g01078 680 ProSiteProfiles Protein kinase domain profile. 327 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01078 680 PANTHER BNAC06G02630D PROTEIN 8 674 - -
Chy06g01078 680 Pfam Protein kinase domain 331 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01078 680 CDD STKc_IRAK 333 595 - -
Chy06g01078 680 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01078 680 MobiDBLite consensus disorder prediction 661 680 - -
Chy06g01078 680 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Chy06g01078 680 Pfam SPARK 28 160 IPR043891 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g00198 Chy-Chr5:1636607 Chy06g01078 Chy-Chr6:8908168 5.65E-60 dispersed
Chy06g01078 Chy-Chr6:8908168 Chy09g00179 Chy-Chr9:1520706 3.50E-75 dispersed
Chy09g01363 Chy-Chr9:15480181 Chy06g01078 Chy-Chr6:8908168 2.10E-55 dispersed
Chy06g01078 Chy-Chr6:8908168 Chy05g01369 Chy-Chr5:17799292 1.23E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71330 PF00069 Pkinase 7.60E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01078 - - csv:101219079 1282.32