Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01079 ATGAGCATTGCCGCGAATCAAAGAGGGTCCCGATCATGGGCCACCGCCGAGGAGTTGCCGGTGTCCATTGGGGCTCCGATACCACCCAAGAAAAAATGGTCAAATGCGATGCCTCTGTTCATCGCTCTCGTCGTCGTAGCAGAGATTATCTTTCTTGGTCGCCTCGATGTGGCTAAAAATGTAGCTATGGTCGATTCATGGGCTGATTTGTTCTATCGTTCGCCGCCTTCCCTTGCACTGATCGACGAAGGTGATGACTTGAATTCCCGGTTCATTGACGGCGATCGGATTTCGGAATTGGGGATTTGTGAGGAGTGGTTGGAGAAAGAAGACGCTGTGACGTATTCTAGGGATTTCCAAAAGGAGCCGATTTTGGTTTCTGGGTCTAATGAGGGGAGGAAATCTTGTGCCGTAGAATGTGAATTTCAGGCCAGTCCAAGTAAGGATCCAGATGCTGCTTTTGGTTTAAATCACCAGGGTGGAATGCCTTCAATTATTCGATCCATGGAATCATCTCTATATTATGCAGATATCAATATCGCCCGGGCACGACGGAATGGCTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCTCCAGTGCAGGCAAAGAGTGAGAGAGCCCTTGCAGCTGCTTTCATTTCAAATTGTGGTGCGCGTAACTTCCGCCTGGAAGCTCTTGAGGCTCTTGAAAAGCTGAACGTCACAATAGATTCCTATGGTTCTTGTCACAGAAATCGTGATGGAAGCACAGTAAACAAATTGGAGGCTCTAAAGCGCTACAAGTTCAGCTTGGCTTTTGAAAATTCCAACGAGGAAGATTATGTGACAGAAAAATTTTTCCAATCTCTAGTTGCTGGAGCTATTCCAGTCGTTATTGGAGCTCCAAATATTCAAGATTTTGCTCCATCACCTGCTTCAATTTTGCATATCGGGGAACTTTCAGATGTTAAGTCAGTTGCCAATTCTATGAAATACCTTGCAGCAAATCCTGAGGCATTCAACGATTCTCTGAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAAGCACTATTGGATATGGGAGCAGTTCATTCGTCATGTCGCCTTTGTATTCACGTGGCAACTCGTATTCATGAGACCGAAGAAAAGGGTTTAGCATTCAAAAATCGACCATGTAAATGCACCAGAGGTTCTGAGACCGTTTATCACTTATATGTTAGAGAAAGAGGAAGGTTTAATTCTGAGTCCATTTTCTTAAGGTCGAGTAATCTGACGGTTGAAGGGCTGGCCTCAGCAGTGATTTCGAAGTTTACTTCTCTGAAGCACGAACCAATATGGAAGCAGGAGAGGCCTAAAAGCTTAAAAGGAGGTGATGAATTAAGGTTGTACAAAATATATCCAGTTGGGTTGACCCAGAGGCAAGCTTTATATACCTTCAGATTTAAAGGGGACTCTGATTTCCGAAGATACGTGGAAGATAACCCTTGTGCTAAACTTGAAGCCATTTTTGTATAG 1545 44.47 MSIAANQRGSRSWATAEELPVSIGAPIPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSWADLFYRSPPSLALIDEGDDLNSRFIDGDRISELGICEEWLEKEDAVTYSRDFQKEPILVSGSNEGRKSCAVECEFQASPSKDPDAAFGLNHQGGMPSIIRSMESSLYYADINIARARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKSERALAAAFISNCGARNFRLEALEALEKLNVTIDSYGSCHRNRDGSTVNKLEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGAIPVVIGAPNIQDFAPSPASILHIGELSDVKSVANSMKYLAANPEAFNDSLRWKYEGPSDSFKALLDMGAVHSSCRLCIHVATRIHETEEKGLAFKNRPCKCTRGSETVYHLYVRERGRFNSESIFLRSSNLTVEGLASAVISKFTSLKHEPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFRFKGDSDFRRYVEDNPCAKLEAIFV* 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8913819 8956025 - Chy6G116070.1 Chy06g01079 228788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01079 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 388 IPR001503 GO:0006486|GO:0008417|GO:0016020
Chy06g01079 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 389 - -
Chy06g01079 514 Gene3D - 167 363 IPR038577 -
Chy06g01079 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 31 492 IPR001503 GO:0006486|GO:0008417|GO:0016020
Chy06g01079 514 PANTHER BNAA06G03030D PROTEIN 31 492 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00056 Chy-Chr1:419901 Chy06g01079 Chy-Chr6:8913819 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01079 K00753 - csv:101202837 1001.5