Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01098 | ATGGAAATGGATCGAATCAAAGAAGAGAATAAGGCGTTGAGAAAAGCTGTGGAACAGACAATGAAAGATTATTATGATCTTGAAATGAAAATTGGTTTCTTTCAACAAAACAATAACCTCAACAACAAGCTGGAGTGTGATCATAACTTCCTATCCTTCCATGGAAGTGAGAACAAAAGGCACGAAGAACCAACAAAACATGACCTCGAACTCGGAGGAATGGCAAAGAAGAAGAGACGAGTTGGGTCGGCATCGAAGGAGGACGAAATGAGGGAGAGTGAACTAGGGTTATCATTAGGGCTCCATACAAAAAACAGTAATAATGATTTGGAACAAGAAGATCATGATAGGGAATTATTAATAGAAGAAGAGAGAAGAGAAATTAAGAACAAGGAAAATTCAACAATAATGTCAAATTTCAATTCAATCCAAAGCAAACCACAAAGGCCTGAATTGCAAGCAATGGCACCCCCACAAAACAGAAAAGCTAGGGTTTCTGTAAGAGCAAGATGTGAATCTGCCACTATGAATGATGGTTGCCAATGGAGGAAATATGGTCAAAAAATTGCAAAGGGAAATCCATGCCCTCGAGCATATTATCGTTGCACTGTTGCACCGGGTTGTCCGGTTAGAAAACAGGTACAAAGATGCTTAGAAGACATGTCAATTCTAATAACAACATACGAAGGAACACATAATCATCCTCTCCCTGTTGGAGCAACAGCCATGGCTTCCACAGCTTCAGCAGCTTCTGCTTCCTTTATGCTCTTAGACTCATCTAATACTAATAATACCAATCTTTCTAATTCTCTTCATCTAAACCCTAATATTCTTAACTCTTCTTCTCCTTCTTTCCTCCAAACTCAAAACCCTAATAACCATCTTTTCACCCCATTATTCCCCACCTCCTCAACCTCCCACTTCCCCCATTCCTTTTACCATTCCAACTTTCAACCTAATCATCTTGTTGGTCCTCTCGACCGTCGCACGTGGAAACCGACCGATGATAATAAGCCACCACCGTTCACGCCCGATGCCGTGTCTGCCATTGCTTCTGACCCTAAGTTTCGAGTTGCCGTTGCGGCCGCTATTTCTTCGCTCATTAACAAAGAGAATGAACAAATGACGACAACGATGACTGGAGAGACGGTCACGGATGGTAAAGGTGGTGGTGGCAGCGATAGTGATAGTGGAAACAAGAAATGGGTTGTTGAATCCCTCTCATCAAAATCAAATGGTACTTGA | 1245 | 41.69 | MEMDRIKEENKALRKAVEQTMKDYYDLEMKIGFFQQNNNLNNKLECDHNFLSFHGSENKRHEEPTKHDLELGGMAKKKRRVGSASKEDEMRESELGLSLGLHTKNSNNDLEQEDHDRELLIEEERREIKNKENSTIMSNFNSIQSKPQRPELQAMAPPQNRKARVSVRARCESATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAASASFMLLDSSNTNNTNLSNSLHLNPNILNSSSPSFLQTQNPNNHLFTPLFPTSSTSHFPHSFYHSNFQPNHLVGPLDRRTWKPTDDNKPPPFTPDAVSAIASDPKFRVAVAAAISSLINKENEQMTTTMTGETVTDGKGGGGSDSDSGNKKWVVESLSSKSNGT* | 415 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9215281 | 9218207 | - | Chy6G116260.1 | Chy06g01098 | 228807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01098 | 414 | MobiDBLite | consensus disorder prediction | 71 | 95 | - | - | |
Chy06g01098 | 414 | MobiDBLite | consensus disorder prediction | 372 | 414 | - | - | |
Chy06g01098 | 414 | Coils | Coil | 3 | 23 | - | - | |
Chy06g01098 | 414 | ProSiteProfiles | WRKY domain profile. | 171 | 237 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01098 | 414 | Gene3D | WRKY domain | 161 | 238 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01098 | 414 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 408 | IPR044810 | GO:0003700 | |
Chy06g01098 | 414 | PANTHER | WRKY TRANSCRIPTION FACTOR 9-RELATED | 1 | 408 | - | - | |
Chy06g01098 | 414 | Pfam | WRKY DNA -binding domain | 177 | 235 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01098 | 414 | MobiDBLite | consensus disorder prediction | 399 | 414 | - | - | |
Chy06g01098 | 414 | SMART | WRKY_cls | 176 | 236 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01098 | 414 | MobiDBLite | consensus disorder prediction | 71 | 115 | - | - | |
Chy06g01098 | 414 | SUPERFAMILY | WRKY DNA-binding domain | 169 | 237 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02515 | Chy-Chr2:28539679 | Chy06g01098 | Chy-Chr6:9215281 | 9.04E-46 | dispersed | |
Chy04g01341 | Chy-Chr4:20002932 | Chy06g01098 | Chy-Chr6:9215281 | 8.49E-28 | dispersed | |
Chy06g01098 | Chy-Chr6:9215281 | Chy12g01329 | Chy-Chr12:17635968 | 1.72E-50 | dispersed | |
Chy06g01098 | Chy-Chr6:9215281 | Chy01g00439 | Chy-Chr1:3151990 | 1.38E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18166 | PF03106 | WRKY | 1.60E-24 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01098 | - | - | cmo:103496139 | 669.848 |