Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01098 ATGGAAATGGATCGAATCAAAGAAGAGAATAAGGCGTTGAGAAAAGCTGTGGAACAGACAATGAAAGATTATTATGATCTTGAAATGAAAATTGGTTTCTTTCAACAAAACAATAACCTCAACAACAAGCTGGAGTGTGATCATAACTTCCTATCCTTCCATGGAAGTGAGAACAAAAGGCACGAAGAACCAACAAAACATGACCTCGAACTCGGAGGAATGGCAAAGAAGAAGAGACGAGTTGGGTCGGCATCGAAGGAGGACGAAATGAGGGAGAGTGAACTAGGGTTATCATTAGGGCTCCATACAAAAAACAGTAATAATGATTTGGAACAAGAAGATCATGATAGGGAATTATTAATAGAAGAAGAGAGAAGAGAAATTAAGAACAAGGAAAATTCAACAATAATGTCAAATTTCAATTCAATCCAAAGCAAACCACAAAGGCCTGAATTGCAAGCAATGGCACCCCCACAAAACAGAAAAGCTAGGGTTTCTGTAAGAGCAAGATGTGAATCTGCCACTATGAATGATGGTTGCCAATGGAGGAAATATGGTCAAAAAATTGCAAAGGGAAATCCATGCCCTCGAGCATATTATCGTTGCACTGTTGCACCGGGTTGTCCGGTTAGAAAACAGGTACAAAGATGCTTAGAAGACATGTCAATTCTAATAACAACATACGAAGGAACACATAATCATCCTCTCCCTGTTGGAGCAACAGCCATGGCTTCCACAGCTTCAGCAGCTTCTGCTTCCTTTATGCTCTTAGACTCATCTAATACTAATAATACCAATCTTTCTAATTCTCTTCATCTAAACCCTAATATTCTTAACTCTTCTTCTCCTTCTTTCCTCCAAACTCAAAACCCTAATAACCATCTTTTCACCCCATTATTCCCCACCTCCTCAACCTCCCACTTCCCCCATTCCTTTTACCATTCCAACTTTCAACCTAATCATCTTGTTGGTCCTCTCGACCGTCGCACGTGGAAACCGACCGATGATAATAAGCCACCACCGTTCACGCCCGATGCCGTGTCTGCCATTGCTTCTGACCCTAAGTTTCGAGTTGCCGTTGCGGCCGCTATTTCTTCGCTCATTAACAAAGAGAATGAACAAATGACGACAACGATGACTGGAGAGACGGTCACGGATGGTAAAGGTGGTGGTGGCAGCGATAGTGATAGTGGAAACAAGAAATGGGTTGTTGAATCCCTCTCATCAAAATCAAATGGTACTTGA 1245 41.69 MEMDRIKEENKALRKAVEQTMKDYYDLEMKIGFFQQNNNLNNKLECDHNFLSFHGSENKRHEEPTKHDLELGGMAKKKRRVGSASKEDEMRESELGLSLGLHTKNSNNDLEQEDHDRELLIEEERREIKNKENSTIMSNFNSIQSKPQRPELQAMAPPQNRKARVSVRARCESATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAASASFMLLDSSNTNNTNLSNSLHLNPNILNSSSPSFLQTQNPNNHLFTPLFPTSSTSHFPHSFYHSNFQPNHLVGPLDRRTWKPTDDNKPPPFTPDAVSAIASDPKFRVAVAAAISSLINKENEQMTTTMTGETVTDGKGGGGSDSDSGNKKWVVESLSSKSNGT* 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9215281 9218207 - Chy6G116260.1 Chy06g01098 228807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01098 414 MobiDBLite consensus disorder prediction 71 95 - -
Chy06g01098 414 MobiDBLite consensus disorder prediction 372 414 - -
Chy06g01098 414 Coils Coil 3 23 - -
Chy06g01098 414 ProSiteProfiles WRKY domain profile. 171 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy06g01098 414 Gene3D WRKY domain 161 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy06g01098 414 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 408 IPR044810 GO:0003700
Chy06g01098 414 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 1 408 - -
Chy06g01098 414 Pfam WRKY DNA -binding domain 177 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy06g01098 414 MobiDBLite consensus disorder prediction 399 414 - -
Chy06g01098 414 SMART WRKY_cls 176 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy06g01098 414 MobiDBLite consensus disorder prediction 71 115 - -
Chy06g01098 414 SUPERFAMILY WRKY DNA-binding domain 169 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02515 Chy-Chr2:28539679 Chy06g01098 Chy-Chr6:9215281 9.04E-46 dispersed
Chy04g01341 Chy-Chr4:20002932 Chy06g01098 Chy-Chr6:9215281 8.49E-28 dispersed
Chy06g01098 Chy-Chr6:9215281 Chy12g01329 Chy-Chr12:17635968 1.72E-50 dispersed
Chy06g01098 Chy-Chr6:9215281 Chy01g00439 Chy-Chr1:3151990 1.38E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18166 PF03106 WRKY 1.60E-24 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01098 - - cmo:103496139 669.848