Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01129 ATGATGAAGATTTTGAGCACCTTCCTTCTTCTTTGTTTACTCTCTATAACTTCAACCTCAGCAGCCACTCCAATCGCAAACCCCATATGCCCAATGGACCTTAACTATATCCTCAGAATCCCTTGGAATGCGACTGATTGCCAGAACCCCTTCTTTCAGACAAATGCCCAATCCGCCATGAATGATACCTCCAAAATCCCTTGTTGTCAAACCCTTTTGTCCTTGTTTGGAATTGCTTTGGCCCAACACCTCAAAGAGACTTCTCTTTTCAATCTCCCAGACCTCCCTACATCCAATTCCTGCCTTCGCGATTACCAAACGAAGCTCTCCTCGCTTTCCCTTCCCGACGACCTTGTTTCCCATTGCTTTGATCCTTTGCAATTTGTGATATCTGCTAATGTCTGTGCTGGGATTCAAACTACTCGAGATTGGGTTTCGAAACTTGGTCAGAACTCGCCGCTTGATTCTGGTTGTAAGTCGGAACTTGTTGGTCCTGGTTGTGATGCTTGTCTCGCCGCTGGTTTGAAAGTTCAGACTATTTTGACTGGAATTGATGGTAACAAATCTCATTCTATGGATTGCTTTTACTTTGCTGTTCTTTATGCTGCTGGCATTGTTAATGAGTCTGGCCCTGAGGGCGACAGTGCATTAGATTGCATATTTAATTTGCCATTGAATATTGAAAAGGATTCAAAAAGTAAACATTCTGCTCTAGTTTATGGTCTTACTGCTGCTGCTATTGGAATTTTGGTTGTTTTTGTTCTGATGGGAATAGGATTTTGGTTTTTCAAATGGAAAAAATTGGCTGAGAAGTCTAGTTTAGAGTGTGATGTGGAGTTGGATGAACAAGGGTCTAGGCCACATGCTAGGCCAAACACCGGATCAATTTGGTTTAAGATTCAGGAGCTTGAGAAGGCAACTGATAACTTTTCTTCAAAAAACTTCATCGGGAGAGGTGGGTTTGGTTTAGTTTACAAAGGGACATTACCTGATGGAAGTATGGTGGCAGTCAAGAAAGTAATTGAATCAGATTTTCAAGGCAATGCAGAGTTTTGCAATGAGGTTGAAATAATCAGTAATTTGAAGCATAGAAATCTTGTTCCACTTAGAGGTTGTTGTGTCATCGATGTGGATGACGGTTATGATGAGGGAGTCAGTGAGAGATACCTTGTTTATGATTACATGCCGAATGGAAATCTTGATGATTATTTGTTCCCTATACCATTTGATCAAGTTGGAACTGTTAAAAAATCATTGACGTGGCCTCAAAGGAAGAATATTATTTTGGATGTAGCAAAAGGCTTAGCTTATCTGCACTATGGAGTGAAACCTGCCATATATCACAGAGATATCAAGGCGACAAACATATTGCTAGATGCAGATATGAGAGCAAGAGTGGCGGATTTCGGGCTCGCCAAACAGAGCAGGGAAGGACAGTCTCATCTTACAACTCGAGTTGCAGGAACTCATGGTTATTTAGCCCCTGAATACGCACTTTATGGACAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGATTTCTCTTTGTCGTCATCACCACGTGCGTTCCTGATCACAGATTGGGCTTGGTCCTTGGTTAAAGCTGGAAAGATAGGAGATACTGTAGATCCTTCTCTACTGAAAGATGGAGACTCTTCTAACTCAAATCCTAGAGCCATTATGGAGAGATTCATTGCAGTTGGAATTTTATGTTCTCATGTGATGGTGGCTTTGAGACCCACCATTATGGAAGCTTTGAAAATGTTGGAAGGTGACATCGAAGTTCCCCAAATTTCTGATCGGCCGGTGCCTTATGGGCATCCTTCATTCGTTGGTGATGGCAGCAACTTCAGTATATCACCGACATTAAGTGGACATCAATTGCATAACGGCGAAAATGCGTCAAGAGTTTGTTATATTTCTCATGTAGCAACTCAAATGAAGGCCGCCATTTGGGATTATCCAAATGCAGTTAGACAACATTTCCGATCCTTTAATGAAATGATATCTACTACAGAAAAGGAAATCTTGGAGACTGAAGAATCTGAGAAGTGGAAACTGGTGGTCTCCCTAGAGGCAGTTAGGACGAGCAATTGGGAGTTAGGTGAGGTTTTAATGATTCTCGTCGTCTGTCTATTCGGAGCCCTCTTCGTAGTTGTTAGTGCCTGA 2211 41.84 MMKILSTFLLLCLLSITSTSAATPIANPICPMDLNYILRIPWNATDCQNPFFQTNAQSAMNDTSKIPCCQTLLSLFGIALAQHLKETSLFNLPDLPTSNSCLRDYQTKLSSLSLPDDLVSHCFDPLQFVISANVCAGIQTTRDWVSKLGQNSPLDSGCKSELVGPGCDACLAAGLKVQTILTGIDGNKSHSMDCFYFAVLYAAGIVNESGPEGDSALDCIFNLPLNIEKDSKSKHSALVYGLTAAAIGILVVFVLMGIGFWFFKWKKLAEKSSLECDVELDEQGSRPHARPNTGSIWFKIQELEKATDNFSSKNFIGRGGFGLVYKGTLPDGSMVAVKKVIESDFQGNAEFCNEVEIISNLKHRNLVPLRGCCVIDVDDGYDEGVSERYLVYDYMPNGNLDDYLFPIPFDQVGTVKKSLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDFSLSSSPRAFLITDWAWSLVKAGKIGDTVDPSLLKDGDSSNSNPRAIMERFIAVGILCSHVMVALRPTIMEALKMLEGDIEVPQISDRPVPYGHPSFVGDGSNFSISPTLSGHQLHNGENASRVCYISHVATQMKAAIWDYPNAVRQHFRSFNEMISTTEKEILETEESEKWKLVVSLEAVRTSNWELGEVLMILVVCLFGALFVVVSA* 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9758759 9761566 + Chy6G116570.1 Chy06g01129 228838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01129 736 Gene3D Transferase(Phosphotransferase) domain 1 395 613 - -
Chy06g01129 736 SMART serkin_6 310 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01129 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Chy06g01129 736 ProSitePatterns Protein kinases ATP-binding region signature. 316 339 IPR017441 GO:0005524
Chy06g01129 736 Gene3D Phosphorylase Kinase; domain 1 275 394 - -
Chy06g01129 736 Pfam SPARK 27 195 IPR043891 -
Chy06g01129 736 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 641 - -
Chy06g01129 736 SUPERFAMILY Protein kinase-like (PK-like) 288 604 IPR011009 -
Chy06g01129 736 ProSiteProfiles Protein kinase domain profile. 310 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01129 736 Pfam Protein kinase domain 312 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01129 736 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01129 Chy-Chr6:9758759 Chy12g00049 Chy-Chr12:443043 4.55E-77 dispersed
Chy12g00871 Chy-Chr12:14000637 Chy06g01129 Chy-Chr6:9758759 1.87E-07 dispersed
Chy06g01129 Chy-Chr6:9758759 Chy04g01441 Chy-Chr4:21039699 3.39E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71331 PF00069 Pkinase 2.50E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01129 - - csv:101212244 1259.2