Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01131 | ATGGATCATCTCTCCCATGAGCTCAAGATACAGATTTTATTAATAAGGTGGTGGCAGTCGTTCATGGTTGTTTTGGTTTCTTACTCGGTGTGGGTTTACCCATTGGAAGTGGCGTTTCTTGACGCAATTCCCAGGCGAAAATTATTAATTGTTGATACTGTTGTCGATCTCTTCTTCGCCATTGATATTGTCTTCACCTTCTTCATTGCTTACATTGATCATCGCACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTGGCATCAACAATCCCATTTGATACACTGGCCTATCTGTCCACAGGCAAATATGATCTTTGTCTCCCTTTTGCCCTCCTAGGATTGCTAAGATTTTGGCGATTGCGACGTGTCAAGCAATTTTTTACCAGGCTTGAGAAAGACATTAGATTCAGCTACTTTTGGGTTAGATGTGCTAGGCTCCTATCTGTCACTTTATTTTATGTCCACTGTGCCGGATGCGTCTACTACTTATTGGCTGACCGATATCCACATGAAGGGAAAACCTGGATTGGAACCTTATTTCCAAATTTCAAAGAGATTAGCTTTGGAGTGAGATATACTTCAGCCATGTATTGGTCTATCACCACAATGACAACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGTGGAAATGATCTTTATCATTTTCTACATGCTTTTCAATCTGGGGCTTACAGCTTACTTGATCGGTAACATGACAAACTTAGTTGTTGAAGGAACTCGCCGCACAATGGAATTTAGAAACAGCATTGAAATGGCATCGAACTTCGTTAACCGGAATCGCCTGCCTTCGAGGTTGAAGGAACACATATTGGCATACATGTGCTTGAGATTCAAGGCTGAGAGCCTAAACCAACAGCATCTGATTGAACAGCTTCCAAAGTCAATTTGCAAAAGCATATGTCAGCAATTGTTTTTGCCGACCGTGGAGAAAGTCTACCTCTTCAAGGGTGTTTCAAAGGAAACACTTGTAGTGCTGGTAGCGAAGATGAAAGCCGAGTATATACCGCCTAAGGAGGACGTGATAATACAAAATGACACTCCTGATGAAGTTTATATCATTGTGTCTGGGGAAATTGAAATTATTGACTGTGAGATGGATGTGGAACGGATTGTTGGAACGCTACACTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAGAACTCTTTCACAGCTCTTGAAGCTGAAAACAAGTGTATTACAGGAAGCTATGAATTTCAAACAAGAAGACAGTATGGTCATTGTCAAGAACTTCCTTCAGGAGCGTGAGCTCAGCCACAAAATCACCATAGAAGGCTCACCCGAAAAAGAGGTGCCGACGCTGATCGAAGAAAAGGATCAAAGTTTCAACTGGAAACACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGAAAGCTTATCAGATTGCCACATTCAATGGAGGAGCTCAAAAAACTTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATGTGATAAGGGATAATGATAAGATTTTTTTTTCATAG | 1701 | 40.86 | MDHLSHELKIQILLIRWWQSFMVVLVSYSVWVYPLEVAFLDAIPRRKLLIVDTVVDLFFAIDIVFTFFIAYIDHRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFDTLAYLSTGKYDLCLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCVYYLLADRYPHEGKTWIGTLFPNFKEISFGVRYTSAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRLKEHILAYMCLRFKAESLNQQHLIEQLPKSICKSICQQLFLPTVEKVYLFKGVSKETLVVLVAKMKAEYIPPKEDVIIQNDTPDEVYIIVSGEIEIIDCEMDVERIVGTLHCGSMFGEVGALCCKNQNFTYRTRTLSQLLKLKTSVLQEAMNFKQEDSMVIVKNFLQERELSHKITIEGSPEKEVPTLIEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKKLAGEKFGFDARNAVLTNEEGSEIDSIDVIRDNDKIFFS* | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9811722 | 9818312 | + | Chy6G116590.1 | Chy06g01131 | 228840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01131 | 566 | SMART | cnmp_10 | 335 | 452 | IPR000595 | - | |
Chy06g01131 | 566 | ProSiteProfiles | KHA domain profile. | 494 | 566 | IPR021789 | - | |
Chy06g01131 | 566 | PANTHER | POTASSIUM CHANNEL AKT2/3 | 489 | 565 | - | - | |
Chy06g01131 | 566 | PANTHER | POTASSIUM CHANNEL AKT2/3 | 16 | 461 | - | - | |
Chy06g01131 | 566 | Pfam | Ion transport protein | 16 | 264 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Chy06g01131 | 566 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 335 | 454 | IPR000595 | - | |
Chy06g01131 | 566 | Gene3D | Jelly Rolls | 302 | 471 | IPR014710 | - | |
Chy06g01131 | 566 | Gene3D | - | 17 | 258 | - | - | |
Chy06g01131 | 566 | PANTHER | POTASSIUM CHANNEL AKT1 | 489 | 565 | IPR045319 | GO:0005249|GO:0006813 | |
Chy06g01131 | 566 | PANTHER | POTASSIUM CHANNEL AKT1 | 16 | 461 | IPR045319 | GO:0005249|GO:0006813 | |
Chy06g01131 | 566 | PRINTS | EAG/ELK/ERG potassium channel family signature | 63 | 72 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Chy06g01131 | 566 | PRINTS | EAG/ELK/ERG potassium channel family signature | 205 | 222 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Chy06g01131 | 566 | PRINTS | EAG/ELK/ERG potassium channel family signature | 52 | 62 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Chy06g01131 | 566 | PRINTS | EAG/ELK/ERG potassium channel family signature | 249 | 258 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Chy06g01131 | 566 | PRINTS | EAG/ELK/ERG potassium channel family signature | 231 | 242 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Chy06g01131 | 566 | Pfam | KHA, dimerisation domain of potassium ion channel | 494 | 565 | IPR021789 | - | |
Chy06g01131 | 566 | Pfam | Cyclic nucleotide-binding domain | 356 | 437 | IPR000595 | - | |
Chy06g01131 | 566 | CDD | CAP_ED | 335 | 437 | IPR000595 | - | |
Chy06g01131 | 566 | SUPERFAMILY | Voltage-gated potassium channels | 16 | 258 | - | - | |
Chy06g01131 | 566 | SUPERFAMILY | cAMP-binding domain-like | 262 | 452 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00350 | Chy-Chr4:3112466 | Chy06g01131 | Chy-Chr6:9811722 | 2.04E-141 | dispersed | |
Chy06g01131 | Chy-Chr6:9811722 | Chy09g00524 | Chy-Chr9:5434026 | 1.22E-87 | dispersed | |
Chy06g01131 | Chy-Chr6:9811722 | Chy06g00103 | Chy-Chr6:680407 | 2.95E-16 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01131 | K21867 | - | csv:101205212 | 1101.27 |