Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01140 AACCTATTCTCCACTATCATTATCTTGCCGCCGCTCCTTTCTCCTTGTTACTCTCGGAAGCTTGCAATAGAACTTCAGAGGTATTTGGGTTTTGAATTTCGTATCACCAGTAACATCCGTGTTAACTTTGAGAGAGACAAAATGGCTTCTCGTTTCTGGACCCAGGGTGGTGGTAGTGGTTCTGATTCTGAAGCGGAGGAGAGTGACTATGGTGAAGAGCTTGATGACATTCAGGTTGATTCCAACGACCAACCGAACAGAAGCAGATATCTGCAAGGAAATGCCAGTGATAGTGAAGATTCTGAAGATAAGAAGCGTACTGTTAGGTCGGCTAAAGATAAGCGTTTTGAGGAGATGTCTGCTACTGTCGATCAGATGAAAAATGCTATGAAGATCAATGATTGGGTAAGCCTGCAGGAGAGTTTTGATAAAATAAATAAGCAGCTTGAGAAAGTCATGCGTGTTACTGAGTCTGAGAAGGTGCCGACTCTTTATATTAAAGCGCTTGTGATGCTAGAGGATTTCTTAAATGAAGCTATGGCTAATAAGGAAGCTAAGAAGAAAATGAGTACTAGTAATTCTAAGGCACTGAATTCAATGAAACAGAAGCTAAAGAAGAACAATAAGCAATATGAAGAGGTAATTACCAAGTATAGGGAGAATCCTGAGGTTGAGGAAGAAAAGGCTGATGAGATGGATGATGATGATGATGATGATGATGATGAAGAATCTGAATATGAGGATGATCCTTCTAAAATCATGTCTGATTCAGAGCCAGAGCCAGATATAGACGAGGAAGAAGATCTAGATGATCCAAGTCAAAACTGGGAGAAAAAGAAGAGCAAAAAAAACAAGCTCATGGATAAGCAGTTTATGAAGGATCCTAGTGAGATCACATGGGACACTGTGAACAAAAAGTTTAAAGAAGTTGTGGCTGCTCGAGGTAGGAAGGGAACTGGAAGATTTGAGCAGGTTGAACAGCTTACATTCTTAACAAAAGTTGCTAAGACTCCTGCACAAAAGCTTGAGATTTTGTTCAGTGTTGTATCTGCTCAATTTGACGTGAATCCAGGTCTCAGTGGGCATATGCCTATCAGTGTGTGGAAGAAGTGTGTGCAAAACATGCTTTCTATAATTGACATTCTTGTGCAGAATCCCAACATTGTAGTGGATGATATGGTAGAACCAGATGAGAATGAAAGCCAGAAGCCAGCTGACTATAAGGGAACAATTCGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGCGGATTGACACTGAGTTTTTTAAAAGTTTGCAGTGTATTGATCCACATACGCGTGAGTATGTTGAAAGGCTCAGAGATGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGGATATTTGGAACGAGTTGGGGATTACAAAGCGGCTTCAAAAGTTGCCTTGAGGCGTGTTGAACTGATTTATTACAAACCACAAGAGGTTTATGATGCCATGAGAAAGCTTGCAGAGCTGTCAGAAGATGATGGTGGAGATGCAAGTGATGAGGCTAAAGTGGTTGAGGAGAGTAGGGGCCCTGCTGCATTTATTGTCACTCCAGAGCTTGTACCTCGTAAACCCACCTTTCCAGAGAGTAGTAGGGCTTTTATGGACATTCTGGTAACCCTCATATACCAGTATGGAGATGAGCGCACTAAAGCACGAGCTATGCTTTGTGATATTTACCACCATGCTCTCTTAGATGAATTTTATATTTCTCGTGACTTGTTGCTGATGAGTCACTTACAGGATAGTATTCAACACTTGGACATCTCAACACAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTTTATGTGGCTTTCGGGTTGGTCTGATCAGTGAAGGACATGGCTGTCTTTCAGAATTATATTCAGGTGGAAGGGTGAAGGAATTGCTTGCACAAGGTGTCTCACAAAGCCGATACCATGAGAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGAAGGCAGATGCCATACCACATGCACATAAATCTTGAGCTTCTGGAGGCTGTGCATTTAATAAGTGCTATGCTGCTGGAAGTACCCAACATGGCAGGCAATGTTCACGATTCGAAGCGTAAAGTTATCAGTAAGAACTTTAGACGGTTACTAGAGGTGAGTGAGAGACAGACATTTACTGGTCCTCCTGAGAATGTCAGAGATCATGTAATGGCTGCTACCAGGGCACTTCGTAAGGGTGATTTCCAGAAGGCTTATGATGTCATTGCATCTTTAGATGTATGGAAGTTACTCAGGAAACGTAATGAAGTGCTGGAAATGGTTAAAGGAAAGATCAAGGAGGAGGCTCTGAGGACTTACCTTCTCACATACTCCTCATCCTACGATTCTCTCAGTTCGGACCAACTCACCCAAATGTTTGACCTTGCAGAGGGTCAAACACATAGTATCGTGAGCAAGATGATGATTAATGAGGAGCTCCATGCAAGTTGGGATCAGCCAAGTGGGTGCATCATCTTTCACGATGTTACTCACACCCGGTTACAGGGTCTGGCATTCCAATTGGCTGATAAGTTGTCAATCCTTGCTGAAAGTAATGAGAGAGCAGTTGAGGCAAGAATTGGAGGAGGATTAGATTTACCAATGAGGCGAAGGGACAACCAAGAATATGGTGCTGGAGGAGCTGCAGGTGGGAGTAGCAGGTGGCCAGATAACATGTCTTATAATCAAGGAAGGCAAAGCGGTCCTAGTTCGCGTGCAGGATACAGCAGTGGTGGGCGAGGCCAAGGTGGGGTTGGTGGATACTATAGAGACAGGATGGGCCAGTCTCGAGGAGGCAATGCAGGATACCAAAGCACCCGTTATCAAGATGCTGCATATGGGTCGGGTAGAACTGCTTATCAGTCGGGATCTTCCAGAGGATCCCAGATGGATGCTTCTGCTCGAATGGTCAGTCTCAACAAAGGCATTCATGCTTAA 2967 43.48 NLFSTIIILPPLLSPCYSRKLAIELQRYLGFEFRITSNIRVNFERDKMASRFWTQGGGSGSDSEAEESDYGEELDDIQVDSNDQPNRSRYLQGNASDSEDSEDKKRTVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLNEAMANKEAKKKMSTSNSKALNSMKQKLKKNNKQYEEVITKYRENPEVEEEKADEMDDDDDDDDDEESEYEDDPSKIMSDSEPEPDIDEEEDLDDPSQNWEKKKSKKNKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPISVWKKCVQNMLSIIDILVQNPNIVVDDMVEPDENESQKPADYKGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQGYLERVGDYKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDDGGDASDEAKVVEESRGPAAFIVTPELVPRKPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAYDVIASLDVWKLLRKRNEVLEMVKGKIKEEALRTYLLTYSSSYDSLSSDQLTQMFDLAEGQTHSIVSKMMINEELHASWDQPSGCIIFHDVTHTRLQGLAFQLADKLSILAESNERAVEARIGGGLDLPMRRRDNQEYGAGGAAGGSSRWPDNMSYNQGRQSGPSSRAGYSSGGRGQGGVGGYYRDRMGQSRGGNAGYQSTRYQDAAYGSGRTAYQSGSSRGSQMDASARMVSLNKGIHA* 989
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9961872 9966273 + Chy6G116680.1 Chy06g01140 228849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01140 988 MobiDBLite consensus disorder prediction 186 284 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 898 920 - -
Chy06g01140 988 ProSiteProfiles PCI domain profile. 669 841 IPR000717 -
Chy06g01140 988 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 48 987 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Chy06g01140 988 MobiDBLite consensus disorder prediction 875 947 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 81 95 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 65 79 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 52 113 - -
Chy06g01140 988 Pfam PCI domain 709 837 IPR000717 -
Chy06g01140 988 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 770 858 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 205 225 - -
Chy06g01140 988 Coils Coil 194 221 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 226 249 - -
Chy06g01140 988 MobiDBLite consensus disorder prediction 96 113 - -
Chy06g01140 988 SUPERFAMILY Winged helix DNA-binding domain 768 840 IPR036390 -
Chy06g01140 988 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 48 987 - -
Chy06g01140 988 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 95 700 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Chy06g01140 988 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 49 911 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Chy06g01140 988 SMART PINT_4 770 858 IPR000717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01140 K03252 - csv:101203990 1711.43