Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01144 ATGGAGAATCAGTCTTTTTCCATTTTTCAACGAAACCCATGTTTGGATCAAAGGTTTATAGTCTTTGCTTTGATCTTCTTCTCTCTCACTTGCTCCTTCTCACCTTCCTATGGGTATGATTCATTGGACCCTTATGCTAACATTACAATCACTTGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGACATGTGGAGCTGCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGAGGAGGTTATATGGGGTATGTGGGGAGCAGAGACTACTCAACAAGGAAATTGCTCCAAATACGTAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCGGAAATTGTTGATCTCATGCCCGGAGCTCCTTATAAGTTGCAAGTGGCCAATTGCTGTAAAGGAGGTGTTCTATCTTCCATGAGACAAGAGTCTTCCAATTCTGGAGCTGCCTTCCAAATGAATGTTGGGAAGTCTTCTGGAAAGGATGTAGATAGCAAAATGCCAGCAAATTTCACACTGGGGCTTCCTGGATATACTTGTAGTCAACCATTTCAAGTCCCTCCAACCAAGTTCAGTAAGGATGGTGGTCGCCGGTGGATGCAAGTTCTAGAAACATGGAATGTGACCTGTGTTTACTCTCAATTCCGATCATCACCGACACCGGGGTGCTGTGTTTCATTGTCATCCTTCTACAACAGCACCATTGTCCCTTGCCCTCAGTGCAGCTGTGGTTGCCAAGGGCTAAAGGGAACAAAATGTGTCAAGTCAGGTGAAGCTCCTTCAGTGTTGCAACTTCCACATGAACACAACACTGCTGAAGTAGAACCATTGGTGAGGTGTTCACAGCACATGTGCCCAATAAGGGTGCATTGGCATGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATCACAAATCTAAATTTTGCTAAGAATTACTCTGATTGGAACTTAGTAGTAATGCATCCCAACTTGCGGAACATTACTCAAGTTTTCAGCTTCAACTACAGCCCCCTCAATCAGTATGGTAACATCAATGACACAGGGATGTTTTGGGGGATACACTTCTACAATGACTTATTACTCACATCAGGAGAGAGAGGGAATGTCCAAACAGAAATTCTTCTCCAAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTTCCAAGAAGAATTATGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGACTCCCAAATAAAGCACACAGGGCCATGACAGCCCCATTCATAGTTTTCTTCTTCTTGTTTCTTTCTCTATCATTATGA 1356 42.92 MENQSFSIFQRNPCLDQRFIVFALIFFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKKPEIVDLMPGAPYKLQVANCCKGGVLSSMRQESSNSGAAFQMNVGKSSGKDVDSKMPANFTLGLPGYTCSQPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKSGEAPSVLQLPHEHNTAEVEPLVRCSQHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSDWNLVVMHPNLRNITQVFSFNYSPLNQYGNINDTGMFWGIHFYNDLLLTSGERGNVQTEILLQKDSEIFTFREGWAFPRRIMFNGDECVMPPPDQYPRLPNKAHRAMTAPFIVFFFLFLSLSL* 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10026780 10030453 - Chy6G116720.1 Chy06g01144 228853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01144 451 PIRSF COBRA 13 451 IPR006918 GO:0010215|GO:0031225
Chy06g01144 451 PANTHER COBRA-LIKE PROTEIN 6 27 446 - -
Chy06g01144 451 PANTHER PROTEIN COBRA 27 446 IPR006918 GO:0010215|GO:0031225
Chy06g01144 451 Pfam COBRA-like protein 62 224 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01144 Chy-Chr6:10026780 Chy07g00750 Chy-Chr7:8105336 1.15E-163 dispersed
Chy06g01144 Chy-Chr6:10026780 Chy02g02401 Chy-Chr2:27765988 1.92E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01144 - - csv:101210777 929.472