Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01157 | ATGGGTTGCGTTTGCTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGATAGGGTGTCAAGTAAGACCTCTTCTGACCTGCGGGTTGCAAGACTGACTTCGTCATCGAGGGAAGAAGCTTATCGAGCTAAAGATCAGTATGATGGTAATGATGCGAGAGTGACGTTGATTGACAAGCAGGTGAATGGGTCGGGTCGACTGCCAGGCGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGACTGCTCAACATCCTTCAATGGGGATAATTCCGAAGGCAGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCATGGCTGGCTGCAGTTGCAGGAGAGGCAATCAGAGGATGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAGCCCCCTCCCAACCAACTCACTCACACACTTCTAGAGAAGAAAGTCAGAAAATGGACACTCTGCGTACACACCTCATTTTGAAAAAGTTGGATTATCTCAGAATTGAGAGTGATATTACTTGGACGATAATTGGCCAAGGGACTTATAGTAATGTATATAGGGCTCGGGATCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGCGTTCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGACTTGATCATCCAAATGTAATAAAGCTGGAGGGTCTAGTTACATCTCGGATGTCTTGCAGCCTCTATCTTGTTTTTGAGTACATGGAACATGACCTGGCAGGACTTGCATCGCACCCTGGTGTGAAGTTTACAGAGGCGCAGGTTAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGTGATATAAAGGGTTCCAACCTTTTAATTGACAATCATGGCGTCTTGAAAATTGCAGACTTTGGTCTAGCAAGTTTTTTTGATATCCATCAAAATCAGCCTTTGACTAGTCGGGTTGTAACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCCACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACGGAGGTGGAACAGTTACATAAAATATTTAAACTCTGTGGCTCTCCTTCAGAGGATTATTGGAGGAAATCAAGGTTGCCTCATGCAACAATATTTAAGCCCCAACAACCCTATAGACGTTGTGTTGCAGACACATTTAAGGATTTTCCTGCACCTGCTTTAGCTCTCATTGAGACCTTGCTCTCTATAGATCCTGCAGATCGTGGCTCTGCTGCTCTCGCCCTTAAAAGTGAATTTTTTTCAACAAAGCCACTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCAAGCAAAGAATTTGATGCCAAAATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGACATCGGCTTGACCTGCAAAGAAAAGATCGAGATTCTCGAGCTGTCCCTGCACCTGATGCCAATGCTGAATTAGCCTCATCAATGCAGAAAAGACAAGGCCTGTCCGGTTCAAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAGGCATCTGGCTTTCCAATTGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGTGCTGCTTGGGCGAAGGCTAGTAGGAACCCAGATGACCCTCCCAAACTTTCAACTGGGACCGAAACTTTCGCAACTTCAGGACTAGTAGCAGCTAGAAGAAGTATGCTGGCTGAAGATTGTAGGGAAAAATCTGATTCTTCACAAGGAGAGGTTCAAAAGCTAATTGGTAGGTTTCCCGGTTCCTTCAAAGAAACCTCGGAGTCGTCAATGCTACCGGACCAGAAGTTCTCAAATCACAGTATTGCAGGCTCACACGACAAAGAGAGGAGCAGTACTAAAGACCCTATAGTTGTGGGTTATGGCTCGAAGGGTCATAAGATTCATTATTCTGGTCCATTACTGGTTCCTTCCGGTAACATGGACCAAATGTTGAAGGACCATGACCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGCCAAGGTACGGAAGATTCAAGCTGATGGGAAACAGATGTCGACAAATTCATTATTCGTCTCAGGTCGTTAA | 2253 | 45.58 | MGCVCCKPSAIEDSKESPRDRVSSKTSSDLRVARLTSSSREEAYRAKDQYDGNDARVTLIDKQVNGSGRLPGENFERKREKMEHMTAQHPSMGIIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKAPSQPTHSHTSREESQKMDTLRTHLILKKLDYLRIESDITWTIIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNHGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQRKDRDSRAVPAPDANAELASSMQKRQGLSGSKSRSEKFNPHPEEASGFPIDPPRPSQGAERMDSQVRHPKKASHSGPLAQRAAWAKASRNPDDPPKLSTGTETFATSGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIAGSHDKERSSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKVRKIQADGKQMSTNSLFVSGR* | 751 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10239150 | 10244677 | + | Chy6G116850.1 | Chy06g01157 | 228866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01157 | 750 | Gene3D | Phosphorylase Kinase; domain 1 | 175 | 256 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 488 | 609 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 647 | 664 | - | - | |
Chy06g01157 | 750 | ProSitePatterns | Protein kinases ATP-binding region signature. | 180 | 203 | IPR017441 | GO:0005524 | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 646 | 679 | - | - | |
Chy06g01157 | 750 | ProSiteProfiles | Protein kinase domain profile. | 174 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g01157 | 750 | PANTHER | CYCLIN-DEPENDENT KINASE | 179 | 732 | - | - | |
Chy06g01157 | 750 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 151 | - | - | |
Chy06g01157 | 750 | PANTHER | CELL DIVISION PROTEIN KINASE | 179 | 732 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 134 | 154 | - | - | |
Chy06g01157 | 750 | Gene3D | Transferase(Phosphotransferase) domain 1 | 257 | 497 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 488 | 514 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 35 | 50 | - | - | |
Chy06g01157 | 750 | MobiDBLite | consensus disorder prediction | 523 | 539 | - | - | |
Chy06g01157 | 750 | SUPERFAMILY | Protein kinase-like (PK-like) | 177 | 466 | IPR011009 | - | |
Chy06g01157 | 750 | CDD | STKc_CDK9_like | 168 | 458 | - | - | |
Chy06g01157 | 750 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 151 | - | - | |
Chy06g01157 | 750 | SMART | serkin_6 | 174 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy06g01157 | 750 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 294 | 306 | IPR008271 | GO:0004672|GO:0006468 | |
Chy06g01157 | 750 | Pfam | Protein kinase domain | 179 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01157 | Chy-Chr6:10239150 | Chy09g00032 | Chy-Chr9:301478 | 0 | dispersed | |
Chy11g01132 | Chy-Chr11:17026145 | Chy06g01157 | Chy-Chr6:10239150 | 1.61E-80 | dispersed | |
Chy11g01133 | Chy-Chr11:17027780 | Chy06g01157 | Chy-Chr6:10239150 | 1.21E-158 | dispersed | |
Chy06g01157 | Chy-Chr6:10239150 | Chy12g01147 | Chy-Chr12:16403329 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71332 | PF00069 | Pkinase | 6.40E-68 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01157 | - | - | csv:101222182 | 1397.49 |