Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01163 ATGAGATCTCTACTGGTCTCAGAGGTGATGGTGCTTAATCTTCTCAAACCATCTTTATCTTTCCTCGTATGGATATTGTTGAGTTCTTTGCTTTCTTTCTCTCTGGGTTTGAAACAGTCTAATCAAATCTGTGATTCAAAAGATTTATTGGCATTGAGGGGCTTTGTGAATAGCCTTGCAAATAATTCTGTTCTCTCTGTTTGGTTAAATGAATCCAACTGCTGCAATTGGGACGGTGTGAATTGTGGATATGATGGCAACAGCTCGATTACTAACAGAGTTACCAAGTTGGAACTGCCTAATTTGAATCTGAAAGGCAAGGTTTCACAATCACTTGGTGGTTTAGATCAGTTAATTTGGCTGAATCTATCATACAATCAGCTTGAAGGTGTATTGCCAACAGAATTATCAAGCTTGAAGCAACTCCAGGTTTTGGATTTGAGTTACAACAAACTGTCAGGACCAGTCACAAATGCAACTTCAGGATTGATATCTGTTCGTGTTCTAAATATTTCCAGCAATTTATACGTTGGGGATTTTCCTCAGCTTGTGGGATTTCAAAATCTTGTTGCCTTCAACATAAGTAACAATTCTTTCACAGGCCAGCTTTCATCACAGATTTGCAATTCCTCCAACATGATTCAGGTCGTTGATATTTCACTGAACCAAATATCCGGCAATCTTCGAGGTGTCGACAGTTGCAGCAAATCTCTCAAACATTTCCGTGCAGACAGTAATTTACTTACCGGCCATCTGCCAGGTTCGTTGTATTCATTATCATCCATGGAGTATTTTTCAATTCCTGGGAACAGCTTCTTTGGCCAGTTAAGCATGGAACTGAGTAAGCTTTCTAGGCTTAAATCCTTTATAGTATTTGGAAACAAGTTTTCTGGTGAACTTCCAAATGTATTTGGTAATTTTTCAGAATTAGAGGAGTTAGTTGCACACTCCAACATGTTCTCTGGATTATTGCCTTCATCTCTGTCATTGTGCTCAAAGCTTAGAGTGTTTGATCTTAGAAATAATTCTTTAACTGGTACTGTAGATCTTAACTTTTCTACGCTACCAGATCTTCAAATGCTTGATCTAGCCTCAAATCACTTTTCCGGCCCTCTACCAAATTCTCTATCTGATTGCCATGAACTGAAAACTCTTAGCCTTGCCAGGAACAAGTTAACTGGTCAAATTCCTCGAGATTATGCAAAGCTCTCCTCTCTGTCGTTTCTATCTTTGTCGAACAACAGTATCATAGATTTGAGTGGTGCACTATCTACTTTACAAAATTGCAAAAACCTCACTGTTCTCATTCTTACAAAGAACTTTCGTAATGAGGAAATCCCACAGAGTGAAACTGTTTTCAACAATTTGATGCTTTTGGCATTTGGTAACTGTGGTCTAAAAGGATCAATTCCAGGTTGGTTAGTTGGTTGCAAGAAACTAAGCATCCTTGACTTGTCTTGGAATCACTTAAATGGAAGTATCCCTGCTTGGATTGGTCAGCTGGAGAATTTGTTTTACTTGGACTTATCCAACAATTCACTGACTGGAGAAATCCCAAAAAGCTTGACACAGATGAAAGCACTAATTTCCAAAAATGGCAGCTTGTCGGGTTCGACATCTTCTGCTGGAATCCCCCTTTTTGTCAAACGAAATCAAAGTGCCACTGGTCTGCAATACAACCAAGCATCAAGCTTTCCACCATCGATTTACTTGAGCTACAACAGAATTAATGGAACTATTTTTCCGGAAATTGGCAGATTAAAATGGCTGCACGTCTTGGATTTGAGTAGGAATAATATTACTGGCTTCATCCCAGGCACCATATCAGAAATGGAGAACTTGGAAACACTAGATTTGTCAAATAATGACCTTTATGGACAAATTCCACCATCACTCAACAAGCTCACATTCTTGTCAAAGTTTAGCGTGGCAAATAATCACTTGGTGGGACCAATTCCTAGTGGAGGGCAATTCTTAAGCTTTCCCAGCTCCAGCTTTGATGGTAATATAGGACTTTGTGGGGAAATTGATAACCCTTGTCACTCTGGTGGTGATGGGTTAGAAACAAAACCCGAAACCAACAAATTTTCGAAGAGAAGAGTCAATTTCATTCTTTGCCTTACAGTCGGTGCAGCTGCAGCAATTCTCCTGCTCCTTACAGTGGTTCTACTCAAAATTTCCAGAAAAAATGTTGGAGATAGACGAAATAATCGTTTTGATGAGGAATTTGACAGGGCTGACAGGTTGTCTGGAGCTCTTGGATCGTCAAAGTTGGTGCTCTTTCAGAATTCAGAATGCAAGGATCTTACAGTTGCTGAGTTGTTAAAAGCTACTTGCAATTTCAACCAAGCAAACATAATCGGCTGTGGTGGATTTGGCTTGGTTTACAAAGCCAGCCTTCCCAATGGTTCAAAAGCTGCAGTCAAGAGGCTTACAGGAGATTGTGGTCAAATGGAACGGGAATTCCAAGCTGAAGTAGAAGCTCTTTCTCGAGCACAGCATAAGAACCTTGTTTCTCTTCAAGGTTATTGCAAACATGGAAATGACAGGCTATTAATTTACTCCTACATGGAAAATGGAAGTTTGGACTATTGGCTTCACGAGGTTGTTGATAATGATTCAATACTAAAATGGGAAACAAGACTCAAAATTGCACAGGGTGCTGCTCACGGATTGGCTTACTTGCATAAGGAATGTCAGCCCAACATAATTCACCGAGATGTAAAATCCAGCAACATTCTTCTAGATGACAGATTTGAGGCTCATTTAGCTGATTTTGGTCTTTCACGATTACTCCGTCCGTATGACACTCATGTTACCACGGACTTGGTTGGGACTTTGGGTTATATTCCTCCTGAATACAGCCAGACATTGACTGCAACCTGCAGGGGTGATGTTTACAGTTTTGGCGTTGTTCTCCTTGAGCTTCTTACTGGTCGTAGGCCTGTAGAGGTATGCAAAGGTAAAGCCTGCAGGGATTTGGTGTCTTGGGTGATTCAAAAGAAATCAGAAAAGAGAGAAGAGGAGATTATTGATCCTGCACTTTGGAATACAAATAGCAAAAAACAGATTTTAGAGGTTCTTGGTATTACTTGTAAATGCATAGAACAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTAACGTCGTAG 3174 40.08 MRSLLVSEVMVLNLLKPSLSFLVWILLSSLLSFSLGLKQSNQICDSKDLLALRGFVNSLANNSVLSVWLNESNCCNWDGVNCGYDGNSSITNRVTKLELPNLNLKGKVSQSLGGLDQLIWLNLSYNQLEGVLPTELSSLKQLQVLDLSYNKLSGPVTNATSGLISVRVLNISSNLYVGDFPQLVGFQNLVAFNISNNSFTGQLSSQICNSSNMIQVVDISLNQISGNLRGVDSCSKSLKHFRADSNLLTGHLPGSLYSLSSMEYFSIPGNSFFGQLSMELSKLSRLKSFIVFGNKFSGELPNVFGNFSELEELVAHSNMFSGLLPSSLSLCSKLRVFDLRNNSLTGTVDLNFSTLPDLQMLDLASNHFSGPLPNSLSDCHELKTLSLARNKLTGQIPRDYAKLSSLSFLSLSNNSIIDLSGALSTLQNCKNLTVLILTKNFRNEEIPQSETVFNNLMLLAFGNCGLKGSIPGWLVGCKKLSILDLSWNHLNGSIPAWIGQLENLFYLDLSNNSLTGEIPKSLTQMKALISKNGSLSGSTSSAGIPLFVKRNQSATGLQYNQASSFPPSIYLSYNRINGTIFPEIGRLKWLHVLDLSRNNITGFIPGTISEMENLETLDLSNNDLYGQIPPSLNKLTFLSKFSVANNHLVGPIPSGGQFLSFPSSSFDGNIGLCGEIDNPCHSGGDGLETKPETNKFSKRRVNFILCLTVGAAAAILLLLTVVLLKISRKNVGDRRNNRFDEEFDRADRLSGALGSSKLVLFQNSECKDLTVAELLKATCNFNQANIIGCGGFGLVYKASLPNGSKAAVKRLTGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCKHGNDRLLIYSYMENGSLDYWLHEVVDNDSILKWETRLKIAQGAAHGLAYLHKECQPNIIHRDVKSSNILLDDRFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKACRDLVSWVIQKKSEKREEEIIDPALWNTNSKKQILEVLGITCKCIEQDPRKRPSIEEVSSWLDGVTS* 1058
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10295703 10298876 + Chy6G116910.1 Chy06g01163 228872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01163 1057 ProSitePatterns Serine/Threonine protein kinases active-site signature. 903 915 IPR008271 GO:0004672|GO:0006468
Chy06g01163 1057 SUPERFAMILY L domain-like 294 653 - -
Chy06g01163 1057 Gene3D Phosphorylase Kinase; domain 1 747 856 - -
Chy06g01163 1057 Gene3D Transferase(Phosphotransferase) domain 1 857 1056 - -
Chy06g01163 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 447 - -
Chy06g01163 1057 ProSiteProfiles Leucine-rich repeat profile. 405 427 IPR001611 GO:0005515
Chy06g01163 1057 SMART LRR_typ_2 587 610 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 139 162 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 611 635 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 115 138 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 355 379 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 403 426 IPR003591 -
Chy06g01163 1057 SMART LRR_typ_2 501 525 IPR003591 -
Chy06g01163 1057 Pfam Leucine Rich Repeat 503 522 IPR001611 GO:0005515
Chy06g01163 1057 Gene3D Ribonuclease Inhibitor 453 539 IPR032675 -
Chy06g01163 1057 Gene3D Ribonuclease Inhibitor 287 348 IPR032675 -
Chy06g01163 1057 Pfam Leucine rich repeat 569 624 IPR001611 GO:0005515
Chy06g01163 1057 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Chy06g01163 1057 SUPERFAMILY L domain-like 44 323 - -
Chy06g01163 1057 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Chy06g01163 1057 CDD STKc_IRAK 787 1048 - -
Chy06g01163 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 623 1054 - -
Chy06g01163 1057 Pfam Leucine rich repeat N-terminal domain 46 82 IPR013210 -
Chy06g01163 1057 ProSiteProfiles Leucine-rich repeat profile. 613 636 IPR001611 GO:0005515
Chy06g01163 1057 Pfam Protein kinase domain 782 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01163 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 623 1054 - -
Chy06g01163 1057 SMART serkin_6 781 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01163 1057 Gene3D Ribonuclease Inhibitor 42 286 IPR032675 -
Chy06g01163 1057 Gene3D Ribonuclease Inhibitor 349 452 IPR032675 -
Chy06g01163 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 570 625 - -
Chy06g01163 1057 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 448 529 - -
Chy06g01163 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 570 625 - -
Chy06g01163 1057 SUPERFAMILY Protein kinase-like (PK-like) 762 1052 IPR011009 -
Chy06g01163 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 448 529 - -
Chy06g01163 1057 ProSiteProfiles Protein kinase domain profile. 781 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01163 1057 PRINTS Leucine-rich repeat signature 611 624 - -
Chy06g01163 1057 PRINTS Leucine-rich repeat signature 504 517 - -
Chy06g01163 1057 Gene3D Ribonuclease Inhibitor 569 680 IPR032675 -
Chy06g01163 1057 PANTHER PHYTOSULFOKINE RECEPTOR 2 42 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01480 Chy-Chr1:20550764 Chy06g01163 Chy-Chr6:10295703 3.33E-07 dispersed
Chy01g01921 Chy-Chr1:24449899 Chy06g01163 Chy-Chr6:10295703 2.62E-131 dispersed
Chy06g01163 Chy-Chr6:10295703 Chy12g01139 Chy-Chr12:16342205 2.71E-12 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71333 PF00069 Pkinase 3.10E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01163 - - cmo:103496072 1994.55