Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy06g01182 | ATGCTGAAGCCCAAGCCATTTGTCGGAGCTAATGTGTTAGTCTCTCGTAATCTTGTCGCTCCGGATATGTTCGATGCTTTTCACGACGCTCTCAAGCAGAATGGGGCTGAGGTTTTCCTCTGTTGCGATCCCTCTCAAAACGCCCCTAACGATTATCATGTTATCTCCTCCGCCAATCACGCAAAGTTCGAGGATCTTCGCGCCAAGGGATGCAACTTGTTAGGTCCTCAGTGCACGATGTCATGTGCAAAAGAGCACAGACCTCTTCCTCAACAGGATTATACTTGCTGCCTTGCCATGGATGGTGTGAAAATCTTGGCATCCGGTTTTCAGGAAGATGAAAAGGCTGAGATAGGGAAGTTAGTTAGTGCAATGGGGGGAGTATTGCATACGAAAGCATCACTAGATGTCAGTTTTGTTATCATGAAGAATGCTTTGGCTGCGAAATACAAGTGGGCACTCAACATTTCAAAGAAACCAATCGTGTCATTTTCTTGGTTACAACAATGTTGGATTGAACATTGGGTTGTGCCTCAGGAGGGATATCGGGTCCTTCCATTTTCTGGATTGAATATTTCG | 579 | 45.6 | MLKPKPFVGANVLVSRNLVAPDMFDAFHDALKQNGAEVFLCCDPSQNAPNDYHVISSANHAKFEDLRAKGCNLLGPQCTMSCAKEHRPLPQQDYTCCLAMDGVKILASGFQEDEKAEIGKLVSAMGGVLHTKASLDVSFVIMKNALAAKYKWALNISKKPIVSFSWLQQCWIEHWVVPQEGYRVLPFSGLNIS | 193 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 10540647 | 10542130 | - | Chy6G117100.1 | Chy06g01182 | 228891 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy06g01182 | 193 | Gene3D | BRCT domain | 98 | 188 | IPR036420 | - | |
| Chy06g01182 | 193 | Pfam | twin BRCT domain | 103 | 166 | IPR001357 | - | |
| Chy06g01182 | 193 | SMART | BRCT_7 | 97 | 174 | IPR001357 | - | |
| Chy06g01182 | 193 | ProSiteProfiles | BRCT domain profile. | 100 | 184 | IPR001357 | - | |
| Chy06g01182 | 193 | PANTHER | DNA REPLICATION REGULATOR DPB11-RELATED | 7 | 193 | - | - | |
| Chy06g01182 | 193 | SUPERFAMILY | BRCT domain | 58 | 184 | IPR036420 | - | |
| Chy06g01182 | 193 | Gene3D | BRCT domain | 20 | 94 | IPR036420 | - | |
| Chy06g01182 | 193 | CDD | BRCT | 103 | 170 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy06g01182 | Chy-Chr6:10540647 | Chy07g00878 | Chy-Chr7:12059686 | 2.46E-60 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy06g01182 | K10728 | - | csv:101212525 | 377.481 |