Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01185 ATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGGCTAACTAAGCTTCACCATGTCTCCGCCTCCAAACCCACCAAAACAACTAAGCTCACTCTCAGAAAAAATTCCAGATGCTGCTCTGCCATAGCTATTGATGCTCCATCTTCTTTAACAGATGCTGCGGGAATAAGATGGGGTTCCACTACTTTGCAAGGCTTGCGGGAAGAAATGGAAGACGATGCTGTTGTGCGGTCTGATGGTTTCAATGACTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCTGTCAAGTTCCTCAGGGAGGAGCTGTACAAAGACTGCGTCGCAGCCTTGCAGGGCGGCCTGCTATTGAATGGAGGGGATTTTGAATTGATAAAAGCGGCTTTAGAGAAGGCTTTTGATGATACTGATAAGAGACTACTCCTATTGCTTGAGGCAGCTGGGGAGGAAGATGAATCTGGTGCCACTGCAACCGTTACATTCATTCGAAATGATGTGCTGTTCATTTCACATCTTGGTGACTCTTGTGTTGTGTTATCTCGTTCTGGAGGAGCACAGGTGTTGACTAGTTCTCATCGGCCTTATGGAAATAACAGCACATCACTACAAGAGATTAGAAGAATTAGAGAAGCAGGTGGATGGATTGTTAATGGGAGAATCTGTGGGGACATCTCTGTATCACGTGCATTTGGTGACATACGATTCAAGACAAAGAAAAGCGAGATGCTACAGAAAGGAGTTGAAGAAGGAAGATGGTCAGAAAAATTTATTTCTCGTGTACAGTTCAATGGAGATTTGGTTACTGCATCACCAGAAATTTTCCAAGTTACACTCGGATCAAATGCCGAGTTTGTACTGATGGCATCGGATGGCCTATGGGATTACATGAGTAGCTCTGATGCGGTTATGTTTGTTCGGAATGAACTTAGACAGCATGGCGACGTTCAGCTAGCTTGTGAAGCCCTCGCCCAAGCAGCCTTGGACAAAGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTAGGGCGGACAGATTGGCAAAATTTGCCCCTTCAGCAAGACAATGTCATATTTGAACTGGCTCAAGCTTTGGCTACGATGGGACTCGTTTCTTTAGGTATTTGGTGGGCATCCTCTAGTTTCTCTCTTTAA 1164 45.27 MALLSPRLHRFRLTKLHHVSASKPTKTTKLTLRKNSRCCSAIAIDAPSSLTDAAGIRWGSTTLQGLREEMEDDAVVRSDGFNDFLFAAVFDGHGGYSSVKFLREELYKDCVAALQGGLLLNGGDFELIKAALEKAFDDTDKRLLLLLEAAGEEDESGATATVTFIRNDVLFISHLGDSCVVLSRSGGAQVLTSSHRPYGNNSTSLQEIRRIREAGGWIVNGRICGDISVSRAFGDIRFKTKKSEMLQKGVEEGRWSEKFISRVQFNGDLVTASPEIFQVTLGSNAEFVLMASDGLWDYMSSSDAVMFVRNELRQHGDVQLACEALAQAALDKGSQDNISIIMADLGRTDWQNLPLQQDNVIFELAQALATMGLVSLGIWWASSSFSL* 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10603003 10606576 - Chy6G117130.1 Chy06g01185 228894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01185 387 CDD PP2Cc 56 345 IPR001932 -
Chy06g01185 387 Gene3D - 56 351 IPR036457 -
Chy06g01185 387 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Chy06g01185 387 PANTHER PROTEIN PHOSPHATASE 2C 6 382 IPR015655 GO:0004722|GO:0006470
Chy06g01185 387 SUPERFAMILY PP2C-like 54 346 IPR036457 -
Chy06g01185 387 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Chy06g01185 387 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Chy06g01185 387 SMART PP2C_4 47 343 IPR001932 -
Chy06g01185 387 PANTHER PROTEIN PHOSPHATASE 2C 57 6 382 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01185 Chy-Chr6:10603003 Chy05g01245 Chy-Chr5:16855973 1.75E-30 dispersed
Chy06g01185 Chy-Chr6:10603003 Chy01g01939 Chy-Chr1:24635573 3.34E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01185 K04457 - csv:101218076 718.383