Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01251 | ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATATAGGAATAATCAATAGAAGGGTCCAAATCAGTAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACAAGTCTCATGATGATGGTAGATACAGGTGCATCTGAAAACCGTGGGCCGATTGTTGATAAGCATCCAGAGAAAGATGAAGACGGTGGCTATACAAGTGGAGGATGGAAAAGTGAAGATGGGAGACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATAGTCAAACTGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGGTCCCGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTAATGAAGCACCCAAAATTTTTGACGGATACCAAATTAGCTATCAGTGAAACGTATCAACAGACAGATACTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGATGATGGCTCTACTGCTTCAACTGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCAAAGGGAGGTGAAGCGATCCCTCTTTCTGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGAGTAGGAGGAGTGTTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCCGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGTTGCTTGTTGTTGCAAGCGATGGACTTTGGGACGTGGTACGCAATGAGGATGCAGTATTAGTGGCGGGGAAGGAAGATGAACCTGAGGCAGCTGCTCGGAAGCTAACTGAAGCAGCGTTTACGCGTGGCAGTGCTGACAACATAACGTGCATCGTGGTGAAGTTTCATCACGAGAATGCAGGTCCTGTGGCAGAGAACAACTAA | 1053 | 44.63 | MVCSYNIRNVIAQAGHIGIINRRVQISNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRGPIVDKHPEKDEDGGYTSGGWKSEDGRLSWGYSSFRGKRATMEDFFDIKMSKVDSQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLTDTKLAISETYQQTDTEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVVASDGLWDVVRNEDAVLVAGKEDEPEAAARKLTEAAFTRGSADNITCIVVKFHHENAGPVAENN* | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 11498707 | 11503815 | + | Chy6G117790.1 | Chy06g01251 | 228960 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01251 | 350 | MobiDBLite | consensus disorder prediction | 62 | 83 | - | - | |
Chy06g01251 | 350 | Gene3D | - | 84 | 343 | IPR036457 | - | |
Chy06g01251 | 350 | MobiDBLite | consensus disorder prediction | 63 | 81 | - | - | |
Chy06g01251 | 350 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - | |
Chy06g01251 | 350 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Chy06g01251 | 350 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 44 | 344 | - | - | |
Chy06g01251 | 350 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - | |
Chy06g01251 | 350 | PANTHER | ALPHABET, ISOFORM E-RELATED | 44 | 344 | - | - | |
Chy06g01251 | 350 | SMART | PP2C_SIG_2 | 90 | 338 | IPR001932 | - | |
Chy06g01251 | 350 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169 | |
Chy06g01251 | 350 | SUPERFAMILY | PP2C-like | 88 | 339 | IPR036457 | - | |
Chy06g01251 | 350 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01251 | Chy-Chr6:11498707 | Chy07g00305 | Chy-Chr7:2510023 | 5.32E-121 | dispersed | |
Chy06g01251 | Chy-Chr6:11498707 | Chy04g00256 | Chy-Chr4:2272719 | 1.65E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01251 | K17506 | - | csv:101203681 | 705.286 |