Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01251 ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATATAGGAATAATCAATAGAAGGGTCCAAATCAGTAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACAAGTCTCATGATGATGGTAGATACAGGTGCATCTGAAAACCGTGGGCCGATTGTTGATAAGCATCCAGAGAAAGATGAAGACGGTGGCTATACAAGTGGAGGATGGAAAAGTGAAGATGGGAGACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATAGTCAAACTGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGGTCCCGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTAATGAAGCACCCAAAATTTTTGACGGATACCAAATTAGCTATCAGTGAAACGTATCAACAGACAGATACTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGATGATGGCTCTACTGCTTCAACTGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCAAAGGGAGGTGAAGCGATCCCTCTTTCTGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGAGTAGGAGGAGTGTTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCCGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGTTGCTTGTTGTTGCAAGCGATGGACTTTGGGACGTGGTACGCAATGAGGATGCAGTATTAGTGGCGGGGAAGGAAGATGAACCTGAGGCAGCTGCTCGGAAGCTAACTGAAGCAGCGTTTACGCGTGGCAGTGCTGACAACATAACGTGCATCGTGGTGAAGTTTCATCACGAGAATGCAGGTCCTGTGGCAGAGAACAACTAA 1053 44.63 MVCSYNIRNVIAQAGHIGIINRRVQISNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRGPIVDKHPEKDEDGGYTSGGWKSEDGRLSWGYSSFRGKRATMEDFFDIKMSKVDSQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLTDTKLAISETYQQTDTEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVVASDGLWDVVRNEDAVLVAGKEDEPEAAARKLTEAAFTRGSADNITCIVVKFHHENAGPVAENN* 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11498707 11503815 + Chy6G117790.1 Chy06g01251 228960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01251 350 MobiDBLite consensus disorder prediction 62 83 - -
Chy06g01251 350 Gene3D - 84 343 IPR036457 -
Chy06g01251 350 MobiDBLite consensus disorder prediction 63 81 - -
Chy06g01251 350 SMART PP2C_4 82 336 IPR001932 -
Chy06g01251 350 CDD PP2Cc 94 338 IPR001932 -
Chy06g01251 350 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 44 344 - -
Chy06g01251 350 Pfam Protein phosphatase 2C 96 331 IPR001932 -
Chy06g01251 350 PANTHER ALPHABET, ISOFORM E-RELATED 44 344 - -
Chy06g01251 350 SMART PP2C_SIG_2 90 338 IPR001932 -
Chy06g01251 350 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Chy06g01251 350 SUPERFAMILY PP2C-like 88 339 IPR036457 -
Chy06g01251 350 ProSiteProfiles PPM-type phosphatase domain profile. 92 338 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01251 Chy-Chr6:11498707 Chy07g00305 Chy-Chr7:2510023 5.32E-121 dispersed
Chy06g01251 Chy-Chr6:11498707 Chy04g00256 Chy-Chr4:2272719 1.65E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01251 K17506 - csv:101203681 705.286