Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01325 ATGGAGAATTTAATGGGATTGTTGAGAATTCATGTGTTTAGAGGCGTGAATCTTGCTAAATTGAAGACTCGGGTAGTGAAGCAAAATATAAACCCAGAGTGGAACGAAGATCTAACTCTATCAATCCAAGACCCAAGTCTCCCTGTGAATGTGCTTGTATACGACAAAGATCTATTTTCGCTTGACGATAAGATGGGGGATGCAGAGTTTGATGTTCGGCCATTTGTGGAAGCCGTAAAGATGAGATTGAACAATCTCCCAAGTGGAACCATCATAAGAAAGATTCAACCAAGCAGGGAGAATTGTTTGTCTGAAGAAAGTTGCATAATTTGGGTAAATGGACAAGTTATTCAAAAAATGTTTCTAAGGTTAAGAAATGTGGAGTCTGGTGAAATTGAGCTGCAATTGCAATGGATTGATATTCCTGGCTCTAGAGGATTGTAG 444 39.19 MENLMGLLRIHVFRGVNLAKLKTRVVKQNINPEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNLPSGTIIRKIQPSRENCLSEESCIIWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL* 148
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 12523606 12525072 - Chy6G118530.1 Chy06g01325 229034
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01325 147 Gene3D C2 domain 3 145 IPR035892 -
Chy06g01325 147 ProSiteProfiles C2 domain profile. 1 85 IPR000008 -
Chy06g01325 147 Pfam C2 domain 19 74 IPR000008 -
Chy06g01325 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 139 IPR035892 -
Chy06g01325 147 SMART C2_3c 7 84 IPR000008 -
Chy06g01325 147 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 145 IPR044562 -
Chy06g01325 147 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 3-LIKE 1 145 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01325 Chy-Chr6:12523606 Chy09g00845 Chy-Chr9:11264366 4.16E-57 dispersed
Chy06g01325 Chy-Chr6:12523606 Chy12g01395 Chy-Chr12:18082373 8.18E-69 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01325 - - csv:101218477 285.034