Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01346 ATGGAGTTTCCTCAACGGTTTTTAGCGGCGGTGTTTATGGGTTTTGCCTTTCTGGGTTTTGTCCGGACGGATCTGGCCTCTGATAGGGCCGCGCTGGTGGGTTTTCGGGCGGCCATGGGCGGCCGCCCCCGATTAGAGTGGAATCTCTCCGATGTATCTCCCTGTTCCTGGGCTGGTGTTAACTGTGACAGGAATGGGGTTTTTGAGCTTCGGCTTCCCGCCATGGGGCTTTCCGGTGAGCTTCCGATGGGGCTTGGGAATTTGACGCAGTTACAAACTCTTTCTCTAAGGTTTAATGCTCTGTCTGGACGGATTCCGGCGGATTTTGCGAATCTTCGTGGGTTGAGGAATCTTTACTTGCAGGGGAACTTGTTTTCTGGCGAGATTCCGCCGTTTCTGTTCGATTTGCAGAATTTGGTTCGGTTGAGCATGGCGGACAACAACTTTACAGGTGAGATTTCATCTGGGTTCAACAATTTGTCCCGTTTGGCTACTCTGTATTTACAGAACAATCAGTTTACTGGAGTTATTCCTGAGTTAAATCTCACTCTTGAGCAATTTAATGTGTCGTTTAACCAATTGAATGGTTCGATTCCAACGAAGCTCTCTAGTTTTCCGGCGAGTTCTTTCGAGGGGAATTTGCTCTGTGGGGCGCCATTGTTACTCTGTAACTCAACAGCGACCGAGCCCAGTCCAAAGTCGAAGCTCTCTGGTGGGGTGATTGCTGGAATTGTGATTGGTGGCTTGTTTGTTTTGGCGTTGATTTTGGTTGTTTTGATTCTTGTGTGTCAAAGAAAGAGTAAGGAGAAATCGGAGTCGAAAGAGGTGGTTCGGACGGGAGGTGAGGTTGAGGTGCCGGGAGAGAAGACTACGACAGTGGAAGGGAGTAGCGAAAGAATAAACATAGATCATTTGATTGCACCAAAATCCTCGACAAAGGGCGGCGAACGATATAAGAAATTGGTGTTCTTTGGGAATGTGGGAAATGTGTTTGATTTGGAGGATTTGTTGAGGGCATCGGCGGAAGTCCTTGGGAAGGGGACGTTTGGTACCGCTTATAAGGCGACACTGGAGACAGGGATGGTGGTGGCCGTGAAGCGGTTGAAGGAGATGACAGCAGCGGAGAAGGAATTCAGGGAGAAGATGGAAGAGGTGGGGAGGATGAAGCATGAGAATTTGGTCCCTTTTAGAGCTTATTATTACAGCAGAGAGGAAAAGCTTTTGGTTTATGATTACATGCCGATGGGAAGCTTGTCTGCACTTTTACATGGTAGTAGAGAGTCGGGAAGGACTCCTTTGAATTGGGAAGCAAGGTGTGGCATAGCCCTGGGAGTCGGCCGAGGGATTCATTATCTTCATTCTCAAGGCCCTACGATCTCTCACGGCAACATTAAGTCCTCAAACATTCTCCTCACCCGATCATACGAAGCGTGCGTATCCGACTATGGGCTTGCACAACTAGCCATATCCCCCTCGACTCCAAGTCGTGTTGCTGGGTATCGAGCCCCGGAGGTTACCGATTCTCGAAAGGTATCACAAAAAGCTGATGTTTATAGCTTTGGAGTGTTGTTATTGGAGATGCTAACAGGAAAATCTCCTACACATTCTATTTTCAACGAGGAATCTGTGGATCTTCCTAGATGGGTTCAATCTGTGGTTCAAGAGGAATGGACAGCTGAAGTGTTTGATGAACAACTTCTTAGGTACCAAAATGTTGAAGAGGAAATGGTTCAAGTCTTGGAACTTGCATTGCAATGCACTGTCCCGTATCCCGATAATCGTCCTGGAATGGATGAGATCGTTCGACGCATTGATGAACTTTGTCTATCAACCTCACAAAAACAGAGCGAAGGGATTGACAACAATGGAAATAATGGTATTTCCTCACAGTTTCATTCACTAAGCTCACCTCATCCACCATCTGCAGAGTAG 1932 47.46 MEFPQRFLAAVFMGFAFLGFVRTDLASDRAALVGFRAAMGGRPRLEWNLSDVSPCSWAGVNCDRNGVFELRLPAMGLSGELPMGLGNLTQLQTLSLRFNALSGRIPADFANLRGLRNLYLQGNLFSGEIPPFLFDLQNLVRLSMADNNFTGEISSGFNNLSRLATLYLQNNQFTGVIPELNLTLEQFNVSFNQLNGSIPTKLSSFPASSFEGNLLCGAPLLLCNSTATEPSPKSKLSGGVIAGIVIGGLFVLALILVVLILVCQRKSKEKSESKEVVRTGGEVEVPGEKTTTVEGSSERINIDHLIAPKSSTKGGERYKKLVFFGNVGNVFDLEDLLRASAEVLGKGTFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPFRAYYYSREEKLLVYDYMPMGSLSALLHGSRESGRTPLNWEARCGIALGVGRGIHYLHSQGPTISHGNIKSSNILLTRSYEACVSDYGLAQLAISPSTPSRVAGYRAPEVTDSRKVSQKADVYSFGVLLLEMLTGKSPTHSIFNEESVDLPRWVQSVVQEEWTAEVFDEQLLRYQNVEEEMVQVLELALQCTVPYPDNRPGMDEIVRRIDELCLSTSQKQSEGIDNNGNNGISSQFHSLSSPHPPSAE* 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13079193 13081233 + Chy6G118740.1 Chy06g01346 229055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01346 643 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Chy06g01346 643 PANTHER OS05G0588300 PROTEIN 15 608 - -
Chy06g01346 643 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Chy06g01346 643 ProSiteProfiles Protein kinase domain profile. 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01346 643 Gene3D Phosphorylase Kinase; domain 1 310 412 - -
Chy06g01346 643 MobiDBLite consensus disorder prediction 613 643 - -
Chy06g01346 643 Gene3D Ribonuclease Inhibitor 181 227 IPR032675 -
Chy06g01346 643 Coils Coil 371 391 - -
Chy06g01346 643 Pfam Protein kinase domain 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy06g01346 643 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Chy06g01346 643 CDD STKc_IRAK 344 607 - -
Chy06g01346 643 SUPERFAMILY Protein kinase-like (PK-like) 342 603 IPR011009 -
Chy06g01346 643 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Chy06g01346 643 SUPERFAMILY L domain-like 46 205 - -
Chy06g01346 643 PANTHER LRR RECEPTOR-LIKE KINASE 15 608 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01352 Chy-Chr1:17965266 Chy06g01346 Chy-Chr6:13079193 2.80E-86 dispersed
Chy06g01346 Chy-Chr6:13079193 Chy08g00561 Chy-Chr8:13215235 2.51E-180 dispersed
Chy07g00710 Chy-Chr7:7011152 Chy06g01346 Chy-Chr6:13079193 5.20E-109 dispersed
Chy12g01385 Chy-Chr12:18028647 Chy06g01346 Chy-Chr6:13079193 1.04E-85 dispersed
Chy06g01346 Chy-Chr6:13079193 Chy06g01272 Chy-Chr6:11694990 3.49E-154 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71337 PF00069 Pkinase 2.90E-38 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01346 - - csv:101221942 1199.5