Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01359 ATGAAGCGAGACCACACCCATCAATCCTCAAATCCAGCCACCGCCGTTAAGCCCAAGACATGGGCAGTCGAAGAGGAGGAAGACCACGACAAGCATCTAGCTGCTCTTGGCTACAATGTCCGGTTGTCGGACATGGCGGACGTTGCTTTGAAACTGGAACAGTTAGATATGGTAATGGGTTTATCGGAAGAAGATGGAATTTCTCACCTCTCTTCAAATACAGTCCATTACAATCCTTCCGATGTTTCTTCTTGGGTTCAAAGCATGCTCGCTGAACTCAATACTCCGCTTCAATCCCAAGGAATAATTCACGACCCTGTTCTCGCCATAGCTGAATCCACTTCCTTCTCCGTCGCTGCCGACTTCACCGATGATTCCGAGTACGATCTCAGAGCCATTCCCGGCGTTGCTGCTTTCCCACAAATCGATTCCTCCAACCCCAGAAAGCGATTCAAGAAATCTGATTCTGAATCGCTTCCTGTTACTGCATCTTGTTCTACTTCTTCGTCGTCCTCGTCAGAGCCGTTGCGCTCGGTGGTTCTGGTGGATTCTGCAGAGACTGGTGTCCGTCTAGTCCACAGCCTTCTCGCCTGCGCTGACGCCGTCGACACAAACAATCTCAATCTCGCCGAGGCTCTACTCAAACACATCAGATTCCTCGTTGAGGCTCAGGCCGGTGCTATGAGGAAAGTCGCCGGATATTTCGCTCAAGCTCTCACTTTCCGGATTTACAGATTCTACCCACAGGAGCCCTTCGATTATTTATCTTCATACACCGATCTTCTTCAAATGCATTTCTATGAATCTAGCCCCTATCTAAAATTCGCCCATTTCACTGCCAATCAAGCCATTCTCGAATCCGTTGGATCTGCTGGTTCCATCCACGTCGTCGATTTCAACCTCCAGCAAGGTCACCAATGGCCGCCGTTGATTCAGGCTTTCGCATTCCGACCAGGTGGGCCTCCGGCGTTTCATCTTACTGGAATCCGCCCCACGCCGGAGGAAAATTCTACTGACGGATTACAGGAAGTGGGTGCGAAATTGACGCAATTCGCGGAAAAATTCGGCATGAAATTCGAATTCCGTGGGTTCTTCTGCAACAAGTTGGCCGATCTCGAACCGTCGATACTCAATTTAGAAACAGAAACCGTCGCTATAAACTCCATTTTCGAGCTCCACCGTCTACTTGCCCATCCAGGCGCGATCGAAAAAGTTCTAACCACAATCAAAGAACTGAACCCCAGAATCATTACCGTCGTGGAGCAGGTGGCGGACCACAACGGGCCGTCGTTCGTGGACCGATTCACTGAAGCACTACACTATTATTCAAGCTTATTCGATTCGTTAGAAGGGTCGCCAGCAGGGGGGGACGATGTGGTGAGGTCAGAGGAGTATTTAGGGAGGCAAATCTACAACGTAGTGGCGTGTGAAGGTTCTGACCGTGTGGAGCGGCATGAGACGGTAGCGCAGTGGCGGAGCCGGTTGAGCTCGAGTGGGTTCGAGATGGTTCATTTGGGTTCTAACGCATTCAATCAGGCGAGTACTTTGCTGGCGGCTTTGTTCGGTGGTGGAAATGGGTACAGAGTTGAAGAGAATAATGGGAGTTTGACGTTGGGATGGCACACTCAGCCGCTCATAGCCACCTCGGCCTGGACGGTGGCCGGAGGCGGTGAGTCGACTCGGCCGAGTTAA 1692 51.12 MKRDHTHQSSNPATAVKPKTWAVEEEEDHDKHLAALGYNVRLSDMADVALKLEQLDMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTPLQSQGIIHDPVLAIAESTSFSVAADFTDDSEYDLRAIPGVAAFPQIDSSNPRKRFKKSDSESLPVTASCSTSSSSSSEPLRSVVLVDSAETGVRLVHSLLACADAVDTNNLNLAEALLKHIRFLVEAQAGAMRKVAGYFAQALTFRIYRFYPQEPFDYLSSYTDLLQMHFYESSPYLKFAHFTANQAILESVGSAGSIHVVDFNLQQGHQWPPLIQAFAFRPGGPPAFHLTGIRPTPEENSTDGLQEVGAKLTQFAEKFGMKFEFRGFFCNKLADLEPSILNLETETVAINSIFELHRLLAHPGAIEKVLTTIKELNPRIITVVEQVADHNGPSFVDRFTEALHYYSSLFDSLEGSPAGGDDVVRSEEYLGRQIYNVVACEGSDRVERHETVAQWRSRLSSSGFEMVHLGSNAFNQASTLLAALFGGGNGYRVEENNGSLTLGWHTQPLIATSAWTVAGGGESTRPS* 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13467063 13468754 - Chy6G118870.1 Chy06g01359 229068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01359 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 552 IPR005202 -
Chy06g01359 563 SMART DELLA_2 30 103 - -
Chy06g01359 563 MobiDBLite consensus disorder prediction 1 20 - -
Chy06g01359 563 Gene3D - 28 93 IPR038088 -
Chy06g01359 563 Pfam GRAS domain family 191 552 IPR005202 -
Chy06g01359 563 PANTHER DELLA PROTEIN RGL1 25 552 IPR030006 GO:0003712|GO:0005634
Chy06g01359 563 MobiDBLite consensus disorder prediction 144 173 - -
Chy06g01359 563 ProSiteProfiles GRAS family profile. 182 552 IPR005202 -
Chy06g01359 563 MobiDBLite consensus disorder prediction 157 173 - -
Chy06g01359 563 Pfam Transcriptional regulator DELLA protein N terminal 30 96 IPR021914 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01359 Chy-Chr6:13467063 Chy09g00488 Chy-Chr9:4725309 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18181 PF03514 GRAS 1.60E-118 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01359 K14494 - csv:101203095 1081.24