Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01378 ATGGCGATGATGATTATTCTAACAACACTTTTGGTGATTTTTATTTCATCACTTGCAAAGATTGCATATGATACAATTTCATGCTACTTGTTGACCCCAAGAAGAATCAGGAAGAAGATGGAGAAACAAGGTGTTCGTGGCCCCGTCCCTCGGCCGCTTGTCGGAAACATCCTTGACGTAGCAGCACTTTTAGAAAAATCCACCGCCAAGGACATGAGCTCCATCGATCACAACATCGTCGACCGCCTATTGCCTCATTACACCACCTGGACAAAGCAATACGGAAAGAGGTTTATATATTGGAACGGGATGGAGCCGAGGCTATGTTTGGCGGAGACGGAATTGATAAAAGTAGTATTGAGTAAAAACAGCAATGTGTGTGGGAGATCATGGCTGCAAAGACAGGGAACCAAACATTTCATTGGGAAAGGATTGTTGATGGCAAATGGAGAAGATTGGTATCATCAACGACACATCGCTGCCCCTTCATTTATGGGAGATAAACTCAAGAGCTATGCGGGGTTGATGGTGGAATGCACTAACAAATTGATCCAATCACTTGAGACCGAGTTTGACTCGGGCCGGACCGAGTTTGAGATCGCCGATTATATGAAACAACTCACCGCCGACATCATTTCTCGGACGGAGTTCGATGCGAATTCCGACAAAGGCAACCAAATCTTTCATTTGCTTACTCTTCTTCAGCACCTCTGCGCCCAAGCAAGCCGTCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAATACAATAGGGAAATAAAGTCACTAAAAATGGAGGTAGAGAGGTTATTAATGGAGATCATTCAAAGCAGAAAAGATGGTGTGGAGATTGGTAGAAGTACTTGCTATGGAAGTGATTTATTGGGAATGCTATTGAATGAAATGCAAAGGAGAAGAGATGATGGGGATAATGGTTTCAGCTTGAACTTGCAACTCATAATGGATGAATGCAAAACATTCTTCTTTGCCGGACATGAAACCACTGCCCTTTTGCTCACTTGGACAATCATGTTGCTTGCCACTAACCCTAATTGGCAACAAAAAGTTCGTCATGAAGTCAATCAAGTTTGCCATAATGGTGCTACTCCCTCTGTTGAACATCTCTCTAAGTTCACTTTGTTAAACATGGTGATAAACGAATCACTAAGGCTATACCCACCAGCAACAGTGTTACCAAGAATGGCGTTCGAGGACATAAAGGTAGGAGATTTAGAGATCCCAAAAGGCTTATCAATATGGATTCCAGTGCTAGCAATTCATCACAGTGAAGAGTTGTGGGGAAAAGATGTAAACGAGTTCAAACCAGAAAGATTTGCATCAAAGCCATTTAGTGGTGGACGTTTCATTCCATTTGCAACTGGACCAAGAAACTGCATCGGCCAAGGCTTTGCATTGATGGAAGCTAAGATCATCTTGGCTATGCTTCTCTCTAAGTTTAGCTTCAGTATTTCAGATTCTTATCGCCATGCTCCTGTTAGTGTTCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTATTTGACTCCAATCAATTCTTATCAACCTTAA 1572 42.68 MAMMIILTTLLVIFISSLAKIAYDTISCYLLTPRRIRKKMEKQGVRGPVPRPLVGNILDVAALLEKSTAKDMSSIDHNIVDRLLPHYTTWTKQYGKRFIYWNGMEPRLCLAETELIKVVLSKNSNVCGRSWLQRQGTKHFIGKGLLMANGEDWYHQRHIAAPSFMGDKLKSYAGLMVECTNKLIQSLETEFDSGRTEFEIADYMKQLTADIISRTEFDANSDKGNQIFHLLTLLQHLCAQASRHLCLPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDGVEIGRSTCYGSDLLGMLLNEMQRRRDDGDNGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQQKVRHEVNQVCHNGATPSVEHLSKFTLLNMVINESLRLYPPATVLPRMAFEDIKVGDLEIPKGLSIWIPVLAIHHSEELWGKDVNEFKPERFASKPFSGGRFIPFATGPRNCIGQGFALMEAKIILAMLLSKFSFSISDSYRHAPVSVLTIQPKYGVQVYLTPINSYQP* 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14138848 14143481 - Chy6G119060.1 Chy06g01378 229087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01378 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 514 - -
Chy06g01378 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 514 - -
Chy06g01378 523 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 Coils Coil 261 281 - -
Chy06g01378 523 Pfam Cytochrome P450 87 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 SUPERFAMILY Cytochrome P450 47 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01378 523 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01378 Chy-Chr6:14138848 Chy09g00128 Chy-Chr9:1042262 0 dispersed
Chy06g01378 Chy-Chr6:14138848 Chy05g01336 Chy-Chr5:17483442 7.27E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01378 K10717 - csv:101213604 1041.57