Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01443 ATGGAGCAAGGATCTGGGTTTTCCACTTCTTCCAACCCTTCTCAGCTCTCGCGGGCATGTCTTACAAGGAATCTAATACTTGCATACCAAAGTTTTGGTGTAGTGTATGGAGATTTGAGCACTTCACCGCTCTACGTTTACTCAAGTACATTTGCAGGGAAGTTGCAAAAACATCGAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTTTACATTGATACCATTATTAAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGCGAAGGTATGGGTTGGATTGCAGTACTTAGCTCGTTCACTTATGTGAGATTTAATCAATCCTCTAAGGTTCTTTTGTGCGCCATTTGTTCTCTGGCTGCAGGAGGAACATTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCGGATGAGGAGCTCTCAGCATACAGATATGGTCCATCTTCTCATGCAGTAGCCCCTTCTCAACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACAATCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAACGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTTCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGCTGTTGTCAATTTTCTCTATTGGCCTTTACAACATAATACATTGGAACCCAAGTATTATTCGTGCAATCTCTCCTCATTATGTTATCAAGTTCTTTAGAGTCACTGGTAAAGATGGGTGGCTTTCTCTCGGAGGGATTCTTCTGGCCATAACTGGTACTGAGGCGATGTTTGCGGATCTTGGTCATTTCACTGCTTTGTCGATCAGGATTGCATTTGCATTTCTTATCTACCCTTGTTTGGTTGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTGATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGATCCTGTATTTTGGCCTGTTTTTGTTATTGCCACTCTTGCAGCTATTGTGGGGAGCCAGGCAGTCATTACTGCTACTTTCTCAATTGTTAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTGATGGTCCTCACTCTTTCCATTACAATAGGGTTTCGAGACACGACACTGATTGGAAATGCATATGGACTCGCCTGCATGACAGTTATGTTCGTAACAACATTTCTTATGGCACTTGTCATAGTATTTGTTTGGCAAAAAAGTATCCTGCTGGCCGCACCTTTTCTTATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTAACAGCAGCATTCATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTATCAGCCTTTTTTATGATTGTTATGTTTGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAGGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGTCTCATATACTCGGAATTGGCCACAGGAGTACCTGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCATTTCACAAGGTTTTAGTCTTTGTTTGTGTAAAGTCTGTTCCCGTTCCATATGTCTCCCCCGAAGAACGTTTTCTCATTGGGAGAGTTTGTCCTAGACCATATCGGATGTATCGGTGCATAGTGAGGTATGGCTACAAGGACATTCAAAAGGATGACGGGGACTTTGAGAACCAACTGATACTAAACATTGCAGAATTCATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCCGAAAGTTCTTCAGTTGATGGGAGGATGGCAGTAATAAGCACTCGAAATATACAATCAAGCTTAATAGTGTCAGGGCATGAAGAAACGGGTACCAGCAACTCCATCTACAGCAGCAAATCTGCCACACTCCAAAGTTTACGATCTGTTTACGAGGACGAGAATCCACAACTAAGAAGGCGCCAAGTGAGGTTTCAGTTATCTCCCAGCCCTTCAATGGACCCAAGAGTTAAGGAAGAGTTAATAGACTTGATCCAAGCCAAAGAAGCTGGTGTAGCATATATAATGGGACACTCATATGTGAAGGCTAGACGATCTTCGTCATATTTGAAAAAGCTTGTGATAGATATCGGATACTCATTCCTCCGTAAGAACTGCAGAGGCCCATCTGTTGCACTCAATATCCCGCACATCAGTCTAATTGAAGTGGGCATGATATATTATGTTTAG 2445 42.45 MEQGSGFSTSSNPSQLSRACLTRNLILAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGMGWIAVLSSFTYVRFNQSSKVLLCAICSLAAGGTFALYSLLCRHAKLSLLPNQQAADEELSAYRYGPSSHAVAPSQLKRFLERHKTLRTILLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYVIKFFRVTGKDGWLSLGGILLAITGTEAMFADLGHFTALSIRIAFAFLIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLSITIGFRDTTLIGNAYGLACMTVMFVTTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLTAAFIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSESSSVDGRMAVISTRNIQSSLIVSGHEETGTSNSIYSSKSATLQSLRSVYEDENPQLRRRQVRFQLSPSPSMDPRVKEELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV* 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15380527 15387888 - Chy6G119710.1 Chy06g01443 229152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01443 814 PANTHER POTASSIUM TRANSPORTER 4 21 103 - -
Chy06g01443 814 TIGRFAM kup: potassium uptake protein 127 814 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy06g01443 814 Pfam K+ potassium transporter 29 634 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy06g01443 814 PANTHER POTASSIUM TRANSPORTER 4 124 814 - -
Chy06g01443 814 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 124 814 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy06g01443 814 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 103 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01443 Chy-Chr6:15380527 Chy09g00327 Chy-Chr9:2823954 0 dispersed
Chy07g00842 Chy-Chr7:10959657 Chy06g01443 Chy-Chr6:15380527 1.95E-137 dispersed
Chy06g01443 Chy-Chr6:15380527 Chy04g01475 Chy-Chr4:21404996 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01443 K03549 - csv:101208973 1520.75