Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01467 ATGGCCATCTCTGAAACTCAGTCATCTTTCTCTCTCATCCCTAATTTCCTCTACTCCTCTTCCTCCATTCTCCACTCCACCCTTCCTTCTCAATCTCCATCACAATCCTTCTCCACTCCCATGAAGCCCTTCCCCATTCCTTCTCCCACTGACCCCACCAATAAATTGGAGATGTATTCCCCTGCTTTCTACGCCGCCTGTGCCTTCGGTGGAAGCCTCAGCTGTGGTCTCACTCACACCGCCCTCACTCCTCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAACATTTCATCTGGTTTTGGAGTTTTGCTAAAGGAGCAAGGCATCAGGGGCCTCGTTAGGGGTTGGGCGCCAACTCTACTTGGTTACAGTGCTCAAGGTGCTTGCAAGTATGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTGGGTCCTGAGTATGCAGCAAAATACAAGACATTGATCTATCTTGCTGGTTCTGCGTCCGCTGAAGTGATTGCTGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCTAAATTTGTTAGATCTGAAGGAGCTCTTGGGTTGTACAAGGGTATTGTTCCTCTGTGGGGACGTCAAATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACTTGGTGGAACTTATCTACAAGCATGCAATCACGAAGCCAAAGAATGAATGCAGCAGCGCATTGCAGCTTGGAGTCAGCTTTGCTGGTGGATATATTGCGGGTGTGTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTCGTCTCCTTTCTCAATACTGCTAAAGGGGCTACCGTTGGCGAGGCAATTCAGAAACTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTCATGATTGGTACCCTAACTGGAGCTCAATGGGTTATCTATGACGCCTTCAAAGTTTCTGTTGGACTGCCAACAACCGGTGGGGTTGCTCCTCCCATTGCTGCATCCCCAGAACATACAACTGCAACTGCGTAG 1092 47.53 MAISETQSSFSLIPNFLYSSSSILHSTLPSQSPSQSFSTPMKPFPIPSPTDPTNKLEMYSPAFYAACAFGGSLSCGLTHTALTPLDLVKCNMQIDPVKYKNISSGFGVLLKEQGIRGLVRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHAITKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNTAKGATVGEAIQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTTATA* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15896176 15901630 + Chy6G119950.1 Chy06g01467 229176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01467 363 Gene3D Mitochondrial carrier domain 64 349 IPR023395 -
Chy06g01467 363 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 355 IPR044677 GO:0005315|GO:1990547
Chy06g01467 363 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 355 - -
Chy06g01467 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 243 IPR018108 -
Chy06g01467 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 146 IPR018108 -
Chy06g01467 363 SUPERFAMILY Mitochondrial carrier 64 335 IPR023395 -
Chy06g01467 363 Pfam Mitochondrial carrier protein 64 148 IPR018108 -
Chy06g01467 363 Pfam Mitochondrial carrier protein 163 247 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00582 Chy-Chr1:4159269 Chy06g01467 Chy-Chr6:15896176 4.67E-107 dispersed
Chy02g02696 Chy-Chr2:29827149 Chy06g01467 Chy-Chr6:15896176 0 dispersed
Chy06g01467 Chy-Chr6:15896176 Chy11g01383 Chy-Chr11:20123077 2.67E-08 dispersed
Chy06g01467 Chy-Chr6:15896176 Chy08g00704 Chy-Chr8:14891198 4.35E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01467 K15102 - csv:101203018 695.656