Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy06g01499 | ATGGGAAGGCGATCCATAAGGGTTGCACTTCTCGTCTTTTCTCTTCTTCTTTCTTTGCGACCCCACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTCTAATTCTAAAGATTCTGCCAGTAAAAGTACTCCGAAGCAGGACTGGAACAATGCTCATGAGGTACATTGCTCGAGAGAAAGGAGTCGGGCGGCATGGAAAGTAATTGAGGAGTATCTAATGCCCTTTGTGGAAAAAAAGAAATACAAGATTTCTACTAAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAAAAGTATATCGATCAGCATTTTGACAATCGACACTATAATTTGCTCAATGTGAGTCGAAATAGATGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATTGATGCAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCAGCAAGAAATAAACATATGTGTGAGGGTCTTGCTGACAGCTGTTTTCCTGTCGATGAGGGAGCTTTGGCCAGTCATCTTCATGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGTTCGGACGAGTGTGTTCTACATTGTTGTTTCAGTTTTGACGATCCTTTTTGTTATGTTTTTCTATGTCTTCTTTTACTTGTATAACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCTTAG | 846 | 41.61 | MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQSLNQGSNSKDSASKSTPKQDWNNAHEVHCSRERSRAAWKVIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSVFYIVVSVLTILFVMFFYVFFYLYNRGMRTRPQVLKRLSQSGRKKKPS* | 282 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 16406976 | 16410002 | + | Chy6G120270.1 | Chy06g01499 | 229208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy06g01499 | 281 | MobiDBLite | consensus disorder prediction | 28 | 54 | - | - | |
| Chy06g01499 | 281 | MobiDBLite | consensus disorder prediction | 28 | 58 | - | - | |
| Chy06g01499 | 281 | PANTHER | ZINC FINGER PROTEIN-RELATED | 13 | 281 | - | - | |
| Chy06g01499 | 281 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 117 | 138 | IPR013087 | - | |
| Chy06g01499 | 281 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 13 | 281 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g02640 | Chy-Chr2:29445162 | Chy06g01499 | Chy-Chr6:16406976 | 3.81E-99 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy06g01499 | - | - | csv:101219582 | 567.77 |