Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01525 ATGGGGAAGAACGAATTTCTGACCCCTAAAGCAATCGCAAACAGAATCAAGGCAAAAGGGCTACAGAAGCTGAGATGGTATTGCCAGATGTGTCAAAAGCAGTGCCGGGATGAGAATGGCTTTAAATGTCACTGTATGAGTGAAAGCCACCAGCGCCAGATGCAGATCTTTGGCCAAAATCCCCATCGTATTGTTGAAGGCTACTCTGAAGAGTTCGAGACATCTTTCATGGAGCACATTAAGCGTAGCCATCGGTTCAGTCGTGTGGCAGCTACAGTTGTCTATAATGAATACATTAACGACAGACATCATATTCATATGAATTCAACGCAGTGGGCTACTCTTACTGAATTTGTTAAACATTTGGGTCGAACTGGGCAATGTAAAGTAGAGGAAACTCCCAAGGGTTGGTTCATTACTTACATAGATAGAGATTCAGAGACGCTTTTTAAAGAGAGAATGAAGAATAAGAGGATGCGGGCCGATTTAGCTGAAGAAGAGAAGCAAGAAAGAGAAATAAAGAGGCAAATTGAGAGGGCTGAGCATTTAGCACCTTTGGCTTCTGCATCTGCCGAGCTTTTGGAGGCTGAACAAACAAGAGAGTTGAAATTAGAGAGTGGGGTTAAGCTAGGATTTGCTTTGGGAACAACATCAAAATTGAAGGAGAAGAAAGGAGAGAGTTCCAGGGTAGTTTTTGATGAGGATGAGACGTATGAGACTATCAAGGGGAAACCTGAAGGGACTTCCAAAAATAGGATGGGTAGTGGTGGTGGTCCGTCATCTTTGGAGGAATTGATGAAAGAAGAAGAGATGAAGAAGGAGAAGCTTAATAGGAAGGATTACTGGCTTTGTGATGGAATAATTGTAAAGATTATGAGCAAGGATTTGGCTGAGAAGGGGTACTATAAACAGAAGGGAGTTGTGCGAAAAGTGATAGATAAATATGTTGGAGAGATAGAAATGCTTGACGGCAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCACAAATTGGTGGCTTAGTAAGGATAGTAAATGGCGCATATCGTGGATCAAATGCTAGGTTGTTAGGTGTTGACACTGATAAGTTTTGTGCTAAAGTGCAAATTGAGAAGGGTGTATACGATGGCAGGGTGCTTAAGGCTGTTGAATATGAAGATATTTGTAAACTTGCATCATAA 1194 41.54 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFETSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRMRADLAEEEKQEREIKRQIERAEHLAPLASASAELLEAEQTRELKLESGVKLGFALGTTSKLKEKKGESSRVVFDEDETYETIKGKPEGTSKNRMGSGGGPSSLEELMKEEEMKKEKLNRKDYWLCDGIIVKIMSKDLAEKGYYKQKGVVRKVIDKYVGEIEMLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLAS* 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16857072 16858265 + Chy6G120530.1 Chy06g01525 229234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01525 397 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Chy06g01525 397 Coils Coil 154 183 - -
Chy06g01525 397 CDD KOW_KIN17 342 395 IPR041995 -
Chy06g01525 397 SMART Kin17_mid_2 52 178 IPR019447 -
Chy06g01525 397 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Chy06g01525 397 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 396 IPR037321 -
Chy06g01525 397 PANTHER BNAA05G13760D PROTEIN 1 396 - -
Chy06g01525 397 Gene3D - 286 339 - -
Chy06g01525 397 Pfam KN17 SH3-like C-terminal domain 278 331 IPR041330 -
Chy06g01525 397 Gene3D - 340 396 IPR014722 -
Chy06g01525 397 MobiDBLite consensus disorder prediction 241 261 - -
Chy06g01525 397 Gene3D - 60 160 IPR038254 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01525 Chy-Chr6:16857072 Chy04g00805 Chy-Chr4:10445009 3.59E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01525 K13102 - csv:101216499 746.117