Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy06g01528 ATGGGTATCATCCTCTCCCTCTTCTCCATCTCTATTTTCTTTGTTTTCCTCTTCAGATTCCGGCCACCCCCCGCCGACTTTTCTTCCCCGCCGACGTACCCTCTAATCGGTTGTCTCATCTCCTTCTACATTAACCGCAACCGCCTGTTAGATTGGTACACTGAGCTCTTGTCGAAATCCCCCACCGGCACTATTGTCATCCGCCGCCTCGGCTGTCGACGCACGGTGGTGACCGTGAACCCAGTTAACGTAGAGTATATTTTGACGACCCATTTCCATAATTTCCCTAAAGGCAAGCCTTTCACTGAGATCTTGAATGACTTTCTTGGCTGCGGCATTTTCAACGTCGATGGTGACAAATGGCGGACACAGCGTAAGCTGGCTTGCCATGAATTTAGTGCCAAGTCGCTTCAGGAATTTGTTGTGGAGACGTTGAAGTCAGAGGTTGAGATGCGGTTGTTGCCCGCCCTCGAGGCGTCGGCCCACGACGCTAAAGTCGTGGACTTCCAGGATTTACTAAGAGGATTTGCATTCCGAGTAATTTGTAAGATTGTTTTGGGGAGTGAAGAAGAGACGATCTTTGCGCTTCAAAAGAGCTTCGACGTGGCGTCGGAGGTGTGCGCGAGGCGAGCAATGGAGCCAGTTTACGTGATATGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCAGCGGTTGAAGATGGAGGTGGCGGAGGTTCATCGGAAAGTGATGAACATAATTGACAAAAGAAGAAGGAAGGAGAAGATCCAGGATATCCATGACACCCAAGATCTTCTGTCCAGGTTGATCAAAACCGGGCATGATGATGAGGTGATCCGAGACATGGTGATAAGCTTCATCATGGCAGGTCGAGACACAACTTCTGCTGCAATGACATGGTTGTTTTGGCTACTCTGCATTCATCCCCACATAGAAAATCAATTAATAGAAGAGATAGACTTGATGTCAGTAAAATTGGACTACCAATCTCTGAAGGAGCTCAAATATCTCAATGCATGCCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGACTCAAAGCATGCCGTTGCCGATGACTACTTGCCAGACGGTACTCTCGTCCGATCAGGAGATAGAGTGACATATTTCCCATACGGGATGGGTAGAATGGTGGCTTTGTGGGGGAAGGATCAGTTCGAGTTCAAGCCGAGCCGATGGGTTGTCGAACAAGACGGGCGTGGGGGGCGAAGAAGAGGGGTGAAATTGGTGAGTCCATACAAGTTTCCCATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCCTTCCTTCAGATGAAGTATGTGGTGGCTTCTATTCTTAGCCAATTCAGAATCAAACCTGTTACCGGCGACCAACCAGTGTTTGTGCCGCTGTTGACGGCGCACATGGCCGGCGGCTTCAAGGTTTTTATTCAAAGGAGAGAGAGAGAGAGGGGCAATTCAAGACAAACAAACAAAATCCCCAATATAAAACACAGTACAGTAGAAGAGGCAAGTCAACAATTCCAACACTGA 1554 48.71 MGIILSLFSISIFFVFLFRFRPPPADFSSPPTYPLIGCLISFYINRNRLLDWYTELLSKSPTGTIVIRRLGCRRTVVTVNPVNVEYILTTHFHNFPKGKPFTEILNDFLGCGIFNVDGDKWRTQRKLACHEFSAKSLQEFVVETLKSEVEMRLLPALEASAHDAKVVDFQDLLRGFAFRVICKIVLGSEEETIFALQKSFDVASEVCARRAMEPVYVIWKMKRWFGVGSEQRLKMEVAEVHRKVMNIIDKRRRKEKIQDIHDTQDLLSRLIKTGHDDEVIRDMVISFIMAGRDTTSAAMTWLFWLLCIHPHIENQLIEEIDLMSVKLDYQSLKELKYLNACLCETMRMYPPVPWDSKHAVADDYLPDGTLVRSGDRVTYFPYGMGRMVALWGKDQFEFKPSRWVVEQDGRGGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYVVASILSQFRIKPVTGDQPVFVPLLTAHMAGGFKVFIQRRERERGNSRQTNKIPNIKHSTVEEASQQFQH* 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 16890944 16895093 - Chy6G120560.1 Chy06g01528 229237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy06g01528 517 MobiDBLite consensus disorder prediction 487 517 - -
Chy06g01528 517 PANTHER CYTOCHROME P450 25 486 - -
Chy06g01528 517 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 SUPERFAMILY Cytochrome P450 19 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 MobiDBLite consensus disorder prediction 496 517 - -
Chy06g01528 517 Pfam Cytochrome P450 29 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 Gene3D Cytochrome P450 23 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy06g01528 517 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 25 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01528 Chy-Chr6:16890944 Chy12g00710 Chy-Chr12:10630154 8.44E-122 dispersed
Chy01g01008 Chy-Chr1:10559765 Chy06g01528 Chy-Chr6:16890944 5.53E-140 transposed
Chy02g02656 Chy-Chr2:29595310 Chy06g01528 Chy-Chr6:16890944 1.82E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy06g01528 K20665 - csv:101207598 933.324