Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy06g01543 | ATGGAGAATTATCAGATGTTCTTTCCTTTGTCCGATGGGGGCGGAGAACTGTCAGCCTATCATCATGCCGACATGTCGTCCGGCGGTGCTTCTGATATGTTCGGTAATTTTCAGGGTGGCGATATGGAGGCGGTAAGTGGGTTTTTGGGGATGAAAAGAGAGGTGGATGGCGGGGCGGTGGAAGTAGAGGGCGGAGGGAAAAAGAAGGGAGAGAAGAAGGTGAGGAAGCCGAGATATGCTTTTCAGACAAGAAGCCAAGTTGACATTCTTGACGATGGGTATCGTTGGAGAAAATATGGTCAAAAAGCTGTCAAAAACAATAAGTTTCCGAGGAGCTATTATAGATGCACACATCAAGGGTGCAATGTGAAGAAACAAGTGCAGAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGAATGCACACACACTCCATTGATAAGCCAACAGATAACTTTGAACAAATACTGAGTAGAATGCAGATTTATAGTAATCCTTTTTGA | 513 | 45.03 | MENYQMFFPLSDGGGELSAYHHADMSSGGASDMFGNFQGGDMEAVSGFLGMKREVDGGAVEVEGGGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSNPF* | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 17107919 | 17110523 | - | Chy6G120710.1 | Chy06g01543 | 229252 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy06g01543 | 170 | ProSiteProfiles | WRKY domain profile. | 85 | 150 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01543 | 170 | SUPERFAMILY | WRKY DNA-binding domain | 82 | 149 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01543 | 170 | Pfam | WRKY DNA -binding domain | 91 | 147 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01543 | 170 | Gene3D | WRKY domain | 67 | 150 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01543 | 170 | SMART | WRKY_cls | 90 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy06g01543 | 170 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 54 | 165 | - | - | |
Chy06g01543 | 170 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 54 | 165 | IPR044810 | GO:0003700 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g01543 | Chy-Chr6:17107919 | Chy07g01479 | Chy-Chr7:19127167 | 9.14E-60 | dispersed | |
Chy06g01543 | Chy-Chr6:17107919 | Chy06g00766 | Chy-Chr6:5293301 | 1.66E-36 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18191 | PF03106 | WRKY | 3.30E-26 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy06g01543 | - | - | csv:101219349 | 304.679 |